Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag1035 | ATGGCGGACGAAGATCAACATGATGTGAAGGATGAAGTTGCCGAAATTGCCCCTTTCGATCCAACTAAGAAGAAGAAAAAGAAGAAGGTCGTAATCCAGGACCCTGCTGATGATTCTGTGGACAACTTGGCTGAGAAAACAGAAAGTTTGTCTGTTGCTGATGGGGTTGAAAGTTCATTTTCTGGCTTGAAAAAGAAGAAGAAGAAGCCTGTTGAAACAAGTACCTTGAATGATGAGAGTGGTGATCTAGGGGAAGATATAGATGATCAACCTGTGGAGGAAGAAGAAGGAGAAGGAATTTTCCTGCAGTCTCATTATCCTTGGGAAGGAACTGATCGTGATTATGAATATGAGGAGCTTCTTGGTAGGGTGTTTAACATTCTCCGTGAGAATAATCCTGAGCTAGCAGGAGATAGGCGTAGGACAGTAATGAGGCCTCCCCAAGTTCTTCGTGAAGGCACGAAGAAAACTGTTTTTGTAAACTTCATGGATCTTTGCAAAACTATGCACCGGCAACCAGACCATGTCATGGCTTTCTTGTTAGCTGAATTAGGGACAAGTGGGTCACTTGATGGGCAGCAAAGGCTAGTAATTAAAGGAAGATTTGCACCCAAGAACTTTGAAGGAATTCTGCGTCGCTATATCAATGAATATGTCATCTGCCTTGGGTGCAAAAGTCCGGACACAATACTTTCTAAGGAGAATCGGCTTTTCTTCCTCAGATGTGAGAAGTGTGGCTCTGGAAGATCGGTTGCTCCCATCAAAGCTGGTTTTGTCGCTCGCGTTGGTCGTAGAAAGTAG | 801 | 43.95 | MADEDQHDVKDEVAEIAPFDPTKKKKKKKVVIQDPADDSVDNLAEKTESLSVADGVESSFSGLKKKKKKPVETSTLNDESGDLGEDIDDQPVEEEEGEGIFLQSHYPWEGTDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVIKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRK | 266 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4513886 | 4517455 | + | Conep05aG0106500.1 | Cone5ag1035 | 438053 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag1035 | 266 | Gene3D | - | 112 | 254 | - | - | |
Cone5ag1035 | 266 | MobiDBLite | consensus disorder prediction | 54 | 99 | - | - | |
Cone5ag1035 | 266 | FunFam | Eukaryotic translation initiation factor 2 subunit | 112 | 254 | - | - | |
Cone5ag1035 | 266 | Pfam | Domain found in IF2B/IF5 | 138 | 247 | IPR002735 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cone5ag1035 | 266 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 218 | 253 | IPR016190 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cone5ag1035 | 266 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cone5ag1035 | 266 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 114 | 221 | IPR016189 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cone5ag1035 | 266 | MobiDBLite | consensus disorder prediction | 60 | 75 | - | - | |
Cone5ag1035 | 266 | SMART | eIF2Bneu4 | 139 | 248 | IPR002735 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cone5ag1035 | 266 | MobiDBLite | consensus disorder prediction | 79 | 96 | - | - | |
Cone5ag1035 | 266 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 24 | 255 | IPR045196 | GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005850(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER) | |
Cone5ag1035 | 266 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag0790 | Cone-Chr1:53882463 | Cone5ag1035 | Cone-Chr5:4513886 | 4.40E-105 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag1035 | K03238 | - | vvi:100263785 | 469.159 |