Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1035 ATGGCGGACGAAGATCAACATGATGTGAAGGATGAAGTTGCCGAAATTGCCCCTTTCGATCCAACTAAGAAGAAGAAAAAGAAGAAGGTCGTAATCCAGGACCCTGCTGATGATTCTGTGGACAACTTGGCTGAGAAAACAGAAAGTTTGTCTGTTGCTGATGGGGTTGAAAGTTCATTTTCTGGCTTGAAAAAGAAGAAGAAGAAGCCTGTTGAAACAAGTACCTTGAATGATGAGAGTGGTGATCTAGGGGAAGATATAGATGATCAACCTGTGGAGGAAGAAGAAGGAGAAGGAATTTTCCTGCAGTCTCATTATCCTTGGGAAGGAACTGATCGTGATTATGAATATGAGGAGCTTCTTGGTAGGGTGTTTAACATTCTCCGTGAGAATAATCCTGAGCTAGCAGGAGATAGGCGTAGGACAGTAATGAGGCCTCCCCAAGTTCTTCGTGAAGGCACGAAGAAAACTGTTTTTGTAAACTTCATGGATCTTTGCAAAACTATGCACCGGCAACCAGACCATGTCATGGCTTTCTTGTTAGCTGAATTAGGGACAAGTGGGTCACTTGATGGGCAGCAAAGGCTAGTAATTAAAGGAAGATTTGCACCCAAGAACTTTGAAGGAATTCTGCGTCGCTATATCAATGAATATGTCATCTGCCTTGGGTGCAAAAGTCCGGACACAATACTTTCTAAGGAGAATCGGCTTTTCTTCCTCAGATGTGAGAAGTGTGGCTCTGGAAGATCGGTTGCTCCCATCAAAGCTGGTTTTGTCGCTCGCGTTGGTCGTAGAAAGTAG 801 43.95 MADEDQHDVKDEVAEIAPFDPTKKKKKKKVVIQDPADDSVDNLAEKTESLSVADGVESSFSGLKKKKKKPVETSTLNDESGDLGEDIDDQPVEEEEGEGIFLQSHYPWEGTDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVIKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRK 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4513886 4517455 + Conep05aG0106500.1 Cone5ag1035 438053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1035 266 Gene3D - 112 254 - -
Cone5ag1035 266 MobiDBLite consensus disorder prediction 54 99 - -
Cone5ag1035 266 FunFam Eukaryotic translation initiation factor 2 subunit 112 254 - -
Cone5ag1035 266 Pfam Domain found in IF2B/IF5 138 247 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Cone5ag1035 266 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 218 253 IPR016190 GO:0003743(InterPro)|GO:0006413(InterPro)
Cone5ag1035 266 MobiDBLite consensus disorder prediction 1 22 - -
Cone5ag1035 266 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 114 221 IPR016189 GO:0003743(InterPro)|GO:0006413(InterPro)
Cone5ag1035 266 MobiDBLite consensus disorder prediction 60 75 - -
Cone5ag1035 266 SMART eIF2Bneu4 139 248 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Cone5ag1035 266 MobiDBLite consensus disorder prediction 79 96 - -
Cone5ag1035 266 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 24 255 IPR045196 GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005850(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER)
Cone5ag1035 266 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0790 Cone-Chr1:53882463 Cone5ag1035 Cone-Chr5:4513886 4.40E-105 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1035 K03238 - vvi:100263785 469.159