Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1044 ATGAAAACAGTGTACAAGGCAATTGATGAAGTTCTTGGAATGGAGGTAGCCTGGAACCAGGTCAAACTCAATGAAGTGCTCCGCAATCCAGACGATCTACAACGTCTCTACTCAGAGGTCCACCTCCTCAGCACCCTCAATCATGATTCCATCATTCGGTTCTACACCTCTTGGATTGATATTGAGAACAGGACTTTCAATTTCATAACCGAGATGTTCACTTCAGGGACACTCAGAGAATACAGAGAGAAGTATAAGCAAGTTGACATTAGAGCCATTAAGAGCTGGGCCTGCCAAATCCTCCGTGGTCTTGTATACTTGCATGGCCATGACCCTCCTATAATACACAGAGACCTCAAGTGTGACAATGTCTTTGTAAACGGCCATCTTGGGCAAGTCAAGATCGGTGATCTCGGGCTAGCAGCAATTCTTCGAGGTTCCCAGTCTGCTCACAGTGTAATAGGCACACCAGAATTCATGGCTCCAGAATTGTATGAAGAGGATTACAACGAGCTTGTAGATGTCTACTCATTTGGCATGTGTGTTCTTGAGATGTTTACCTCTGAGTACCCTTATAGTGAATGTACCAACCCTGCACAGATATATAAGAAAGTCACATCTGGGAAGCTACCTGCAGCATTGAACCGGATTCAAGACCCACAAGCACGGAGATTTGTGGAAAAATGCTTAGTACCTGCGTCAAAAAGGTTACCAGCTAAAGAGCTATTGCTCGATTCATTTCTCATGGCCGACAAAGATAAACTACCCGAGCATGTATTTGGAAGGCAGAAGCCATTTTTGAATGCCAAAGAAATGGAAAAGCTGCAAGTGAGTGACAGTTCGTGCAGAACCAATATGACAATCACAGGGAAGCTGAATCCTGAAGTACATACCCTCATTCTCAAAGTTCAAGTTGTTGATAAAGATGGTTCCACCAGGAACATATATTTTCCTTTTGATATCGTAAACGACACGGCAACTGAAGTTGCAACAGAGATGGTGAAGGAGTTGGATATTAATGATTGGGTGCCATCTGAAATTGCAGATATGATAGAAGGAGAAATATCTGCTTTGGTTCCAACTTGGAAGAGACATGACTTGTCTCATCAAGAAGCATATCGTACTTTGAATTATCATGGGGAAGACGATTATGATGATGATGCTGATGGGCCTCATCATACTTTTCACTCTTCCTTGTCATCACAAGCAACACTATCAGGCTTGATTGGCTCTCCAAGGATTGATGAAAGGATAACTGGGTTTAATTGGTTCCAGGATTATTTTCTTGATGATACCAGCTCTCAAAGCTCTTCAAATTCCGAAAAGTATTCCAACTTGAATTACTTCTGCAATGACGATCATGAGCCTAACATGAAAACCGAAGGAGGAAGTCAACATCCAATCACACAGAGTCACAAGTCAACAAGGTTTTGTCCAGAAGAACACCGTAACAACGCGGAGTCCTCAGCAAGAAACTATTACAAGCAGTGCTGCAGAGGGTTGCATGGACCCACCACAGATACGAAAATGGACAGGCGTAGGTTAACAAGGAACAGATCACTAGTAGATATGCACAGCCAATTACTACACCGCTCATTGGTGGAGGAAGTGAATAGAAGACGCCTGTTCAAGACAGTCGGAGCTGTGGAGAATATTGGGTTTCAGTCACCATTCCAGGTTCCTTCAGAGCCACCTAGTGATCCCATGACAAGTGCAAGACAAGGCAAGAGGCAAGGGCATCATGGGAGAGCAGAGTAG 1758 43.74 MKTVYKAIDEVLGMEVAWNQVKLNEVLRNPDDLQRLYSEVHLLSTLNHDSIIRFYTSWIDIENRTFNFITEMFTSGTLREYREKYKQVDIRAIKSWACQILRGLVYLHGHDPPIIHRDLKCDNVFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEDYNELVDVYSFGMCVLEMFTSEYPYSECTNPAQIYKKVTSGKLPAALNRIQDPQARRFVEKCLVPASKRLPAKELLLDSFLMADKDKLPEHVFGRQKPFLNAKEMEKLQVSDSSCRTNMTITGKLNPEVHTLILKVQVVDKDGSTRNIYFPFDIVNDTATEVATEMVKELDINDWVPSEIADMIEGEISALVPTWKRHDLSHQEAYRTLNYHGEDDYDDDADGPHHTFHSSLSSQATLSGLIGSPRIDERITGFNWFQDYFLDDTSSQSSSNSEKYSNLNYFCNDDHEPNMKTEGGSQHPITQSHKSTRFCPEEHRNNAESSARNYYKQCCRGLHGPTTDTKMDRRRLTRNRSLVDMHSQLLHRSLVEEVNRRRLFKTVGAVENIGFQSPFQVPSEPPSDPMTSARQGKRQGHHGRAE 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4561701 4566031 + Conep05aG0107600.1 Cone5ag1044 438062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1044 585 ProSiteProfiles Protein kinase domain profile. 1 248 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1044 585 FunFam Probable serine/threonine-protein kinase WNK1 1 71 - -
Cone5ag1044 585 MobiDBLite consensus disorder prediction 555 573 - -
Cone5ag1044 585 CDD STKc_WNK 2 248 - -
Cone5ag1044 585 Gene3D Phosphorylase Kinase; domain 1 1 71 - -
Cone5ag1044 585 FunFam probable serine/threonine-protein kinase WNK9 73 253 - -
Cone5ag1044 585 Gene3D Transferase(Phosphotransferase) domain 1 73 254 - -
Cone5ag1044 585 SMART serkin_6 3 248 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1044 585 SUPERFAMILY Protein kinase-like (PK-like) 3 249 IPR011009 -
Cone5ag1044 585 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 554 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cone5ag1044 585 Pfam Protein kinase domain 3 247 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1044 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone5ag1044 585 MobiDBLite consensus disorder prediction 555 585 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag1044 Cone-Chr5:4561701 Cone7ag0248 Cone-Chr7:1045463 2.14E-146 dispersed
Cone1ag0779 Cone-Chr1:53827788 Cone5ag1044 Cone-Chr5:4561701 0 wgd
Cone19ag1442 Cone-Chr19:9392454 Cone5ag1044 Cone-Chr5:4561701 8.59E-205 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82859 PF14543 TAXi_N 1.30E-48 CL0129 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1044 K08867 - mdm:103418174 779.63