Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1048 ATGAAAAAAATGAGAGCTTCTACTGCTACTAATAGTTCTAAGGTGGCCGCTAACATGGTCGCTGTTTCAATTCTAGTTATCATCATGACTTTCGTGCAGAGCTCTTCAGCCGATCTCTCTCCTACTTTCTACTCAAAAACTTGTCCGCACCTGCTTCCCACCGTGAGAAACGCCGTCCATTCCGCCATCTCGAAGGAACGGCGCATGGGCGCCTCTCTCTTACGTCTCCATTTTCACGACTGTTTCGTCAACGGTTGTGACGCCTCTATACTCCTGGACGACACATCGTCATTTACCGGAGAGCAGACTGCCGGTCCCAATAACAATTCGTTAAGAGGATTTGATGTGATCGACGATATCAAATCAGCGGTGGAGAAAGTCTGCCCTCATGTAGTTTCATGCGCAGATATTGTGACCCTTGCTGCACGTGACTCTGTTGTGATCCTTGGAGGACCAAATTGGAATGTTAAATTGGGAAGAAGAGATTCAAAGACAGCCAGTTTAGCTGCTGCAAACAGTGGAGTCATCCCTCCCCCAACCTCTACCCTAGAAAACCTCAGGAACAGATTCAAAGCCAAAGGCCTCTCTATCAAGGACATGGTCGCCTTATCCGGAGCTCATACAATAGGACAAACAAAGTGTTCAGTATTCAGAGATCGGATCTATAAGGAGGCAAATATCGATGCTTCATTTGCCAAGATCAGACAGAGAACTTGCCCACAAAACTCAGGAAACAATAATCTGGCTCATCTAGATGTACAAACTCCGAATTATTTCGACAACAAGTACTACAAGAACCTTCTTGCCAAAAAGGGTCTCCTCCACTCCGACCAGATACTATACAACGGCGGTTCAACGGATTCTCTGGTTAAAAAGTACAGCTCGAACAGTGACTCTTTCGATTCCGACTTCGTGGAGGCCATGATCAAGATGGGAGACATTAAGCCCCTAACCGGCTCAAAGGGTGAGATTAGAAAGAAGTGTGGGAAGGTTAATTAA 999 46.05 MKKMRASTATNSSKVAANMVAVSILVIIMTFVQSSSADLSPTFYSKTCPHLLPTVRNAVHSAISKERRMGASLLRLHFHDCFVNGCDASILLDDTSSFTGEQTAGPNNNSLRGFDVIDDIKSAVEKVCPHVVSCADIVTLAARDSVVILGGPNWNVKLGRRDSKTASLAAANSGVIPPPTSTLENLRNRFKAKGLSIKDMVALSGAHTIGQTKCSVFRDRIYKEANIDASFAKIRQRTCPQNSGNNNLAHLDVQTPNYFDNKYYKNLLAKKGLLHSDQILYNGGSTDSLVKKYSSNSDSFDSDFVEAMIKMGDIKPLTGSKGEIRKKCGKVN 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4588404 4590051 - Conep05aG0108000.1 Cone5ag1048 438066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1048 332 FunFam Peroxidase 177 311 - -
Cone5ag1048 332 Gene3D - 42 328 - -
Cone5ag1048 332 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601(InterPro)
Cone5ag1048 332 PANTHER PEROXIDASE 72-RELATED 24 331 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 Pfam Peroxidase 55 296 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 FunFam Peroxidase 42 193 - -
Cone5ag1048 332 ProSiteProfiles Plant heme peroxidase family profile. 38 332 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 SUPERFAMILY Heme-dependent peroxidases 38 332 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Cone5ag1048 332 Gene3D Peroxidase, domain 2 177 311 - -
Cone5ag1048 332 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 CDD secretory_peroxidase 39 331 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone5ag1048 332 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1048 332 PRINTS Haem peroxidase superfamily signature 132 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0434 Cone-Chr10:2017359 Cone5ag1048 Cone-Chr5:4588404 8.88E-131 dispersed
Cone3ag0465 Cone-Chr3:2252239 Cone5ag1048 Cone-Chr5:4588404 2.69E-132 dispersed
Cone5ag0153 Cone-Chr5:650032 Cone5ag1048 Cone-Chr5:4588404 3.14E-141 dispersed
Cone5ag1048 Cone-Chr5:4588404 Cone6ag1651 Cone-Chr6:12612075 1.21E-108 dispersed
Cone12ag1482 Cone-Chr12:10585806 Cone5ag1048 Cone-Chr5:4588404 9.78E-118 transposed
Cone1ag1631 Cone-Chr1:57676451 Cone5ag1048 Cone-Chr5:4588404 6.33E-141 wgd
Cone1ag0771 Cone-Chr1:53805768 Cone5ag1048 Cone-Chr5:4588404 1.45E-214 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1048 K00430 - cit:102629997 461.07