Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1050 ATGGCGGAAAACGGGGAGGAGAAATTACTGGCGGTTGCGCGCCACATCGCTAAAACCCTTGGCCACAATGAATCCATGGCTGATGATATCTTACAGATCTTCTCCACCTTCGACGGCAGGTTTTCACGCGAGAAGTTGTCAGAGAAGACGCTCGACGACGATCCTAGAGCCTTTATTGTACTCGCACGGAACCTGGACTCGCTTGACCGTCAGATTTCTCAGTACGTGTCCAACGAGCGTCCGATTTGGGCCGACGCTGCTGATTCCTCGGCCTTCCTCGACGCTATCGACGAGTTGATCGCGATCATCAGGGAATGGACTCCTGCGGTTGGAGACAAGTCTATCGGTGCGTGCTTAGCTCGTGCTGATGATCTGATGCAGCATGCTATGTTTCGAGTCGAGGACGAGTTTAGGTCGTTGATCGAACGCGGCGGCGAGTCGTACGAGTTGACTCGCTCCTCTTACAGGGACGCCGAGTCGACTGGTGATTTATCCTTTGACTCGGTGGATGAAGAAGTAGGCGGAGGAATTATCAGCGATGGTGAGGATCATGAGATCCCGATCGCACAACCTATCACTGACTATGACATCGTGATCGACGCGCTTCCTTCAGGTACGATCAGCGATCTCCATGAGATAGCAAAACGAATGGTGGCTGCCGGATTTGCAAAGGAGTGCTCACACGTGTACAGTAGCTCGAGAAGAGACTTCTTGGAGGAGAGCCTCTCGAGATTAGGGCTACAGAAGCTGAGCATAGAAGAAGTTCAGAAGTTGCCGTGGCAAGATCTAGGAGACGAGATTGAGCGATGGATTAAAGCCATGAACGTCGCTCTTAGAATTCTCTTCCCGAGCGAGCGTAGACTATGCGACCGCCTCTTCTCTGGTTTATCTTCTGCCTCTGATCTGTCATTCATGGAGGTATGCAGGGGATCAATGGTTCATCTCTTGAATTTTGCAGATGCAATCGCAGTCAGCTCCAGATCTCCAGAGAGGCTGTTCAAAATCATGGACATGTACGAGACATTGAGGGACTTGATGCCAGAGTTCGAATCAGTATTCTCAGATAAGTACTGTATGTTTCTTAGAAATGATGCGATTACGATTTGGAAAAGGTTAGGGGAAGCAATCAAAGGGATATTCATGGAACTGGAGAATTCAATCCGTCGGGATCCAGCCAAAGCTGCAGTTCCTGGCGGTGGGCTCCACCCGATCACTCGATACGTGATGAACTATCTACTAGCAGCTTGTCGCTCTAGGCAGACTCTTGAACAGGTCTTTGATGAAAATACCTTTGCTTCAAGAGAATCGACTTCTCTATCAGTGGAAATTGCTTGGATTATGGAGCTGTTAGAGAGCAATTTAGAGATGAAGTCAAAACTATACAAAGACCCTGTGTTGGGCAATGTGTTCATGATGAATAACGGAAGGTATATCGTGCTCAAGGTAAAAGATAACGAACTCGGTTCCCTTTTAGGGGATGATTGGATTAGGAAACACACTGCAAAAGTCCGGCAGTATTTTGTCAATTACCAGAGGAGCTCATGGAATAAAGTTCTAGCTGTTTTGAAGATAGACAATGGCTCATTAGCTCCTAATTCGTCTTCGGCAAATTCCATGAAAGAAAAGCTCAAGTCATTTAACATGTACTTTGATGAAATTTGCAAAGTTCAGTCTACTTTGATAATTTTCGATAGTCAGTTAAGGGAAGAAGCAAGGATTTCAGTTGTGAAAACCGTTTTGCCAGCATACCAGAATTTTATTGCCAGGTACCAGAATGTTGTGGAAAATGGGAAGAGGACTGACCGGTATGTTAAGTTCACTGCTGAGGATGTGGAAGCTCGGATTAATGATTTGTTTCAGGGGAAGGACGGATCGGGTAGTGGGCAGGGGAAGTCAAGGTAA 1902 47.06 MAENGEEKLLAVARHIAKTLGHNESMADDILQIFSTFDGRFSREKLSEKTLDDDPRAFIVLARNLDSLDRQISQYVSNERPIWADAADSSAFLDAIDELIAIIREWTPAVGDKSIGACLARADDLMQHAMFRVEDEFRSLIERGGESYELTRSSYRDAESTGDLSFDSVDEEVGGGIISDGEDHEIPIAQPITDYDIVIDALPSGTISDLHEIAKRMVAAGFAKECSHVYSSSRRDFLEESLSRLGLQKLSIEEVQKLPWQDLGDEIERWIKAMNVALRILFPSERRLCDRLFSGLSSASDLSFMEVCRGSMVHLLNFADAIAVSSRSPERLFKIMDMYETLRDLMPEFESVFSDKYCMFLRNDAITIWKRLGEAIKGIFMELENSIRRDPAKAAVPGGGLHPITRYVMNYLLAACRSRQTLEQVFDENTFASRESTSLSVEIAWIMELLESNLEMKSKLYKDPVLGNVFMMNNGRYIVLKVKDNELGSLLGDDWIRKHTAKVRQYFVNYQRSSWNKVLAVLKIDNGSLAPNSSSANSMKEKLKSFNMYFDEICKVQSTLIIFDSQLREEARISVVKTVLPAYQNFIARYQNVVENGKRTDRYVKFTAEDVEARINDLFQGKDGSGSGQGKSR 633
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 4612611 4614840 - Conep05aG0108200.1 Cone5ag1050 438068
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1050 633 Pfam Exocyst complex component Exo70 N-terminal 65 142 - -
Cone5ag1050 633 SUPERFAMILY Cullin repeat-like 83 619 IPR016159 -
Cone5ag1050 633 Gene3D Exocyst complex component Exo70 76 626 - -
Cone5ag1050 633 PANTHER EXOCYST COMPLEX PROTEIN EXO70 63 622 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cone5ag1050 633 Pfam Exo70 exocyst complex subunit C-terminal 269 617 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cone5ag1050 633 FunFam Exocyst subunit Exo70 family protein 76 627 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0890 Cone-Chr17:7031848 Cone5ag1050 Cone-Chr5:4612611 3.05E-25 dispersed
Cone3ag0313 Cone-Chr3:1592344 Cone5ag1050 Cone-Chr5:4612611 3.22E-65 dispersed
Cone5ag0416 Cone-Chr5:1766096 Cone5ag1050 Cone-Chr5:4612611 1.13E-101 dispersed
Cone5ag1050 Cone-Chr5:4612611 Cone6ag1242 Cone-Chr6:9899471 8.23E-101 dispersed
Cone1ag0768 Cone-Chr1:53788018 Cone5ag1050 Cone-Chr5:4612611 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1050 K07195 - mdm:103412781 902.123