Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag1055 | ATGGCCACAGAATCAACCGCCAATTTCCAAAACCCAGACTTCCGCCCCGTGCCTTCCCCTCCCGATTTCCATCCCCAAATCATGGTCTCTTCTCACGACGGCCTCCACTTCTGGCAGTACATGGTCGCCGGTTCAATCGCCGGTTCAGTAGAGCACATGGCCATGTTCCCTGTCGATACCGTCAAGACCCATATGCAAGCTCTCGGCTCATGCCCCATCAAATCGGTAGGAGTTCGTCAAGCCCTAAAATCAATTCTCAAGAGAGAAGGTGTAGCTGGACTATACCGTGGGATCGGAGCAATGGGTCTTGGCGCGGGGCCTGCCCACGCCGTGTACTTCTCGGTGTACGAGATTTGTAAGGAGTCTTTCTCGACTGGGAATCCGAATAACTCTGCAGTTCATGCTGTTTCGGGCGTGTTTGCTACGGTGGCGAGTGATGCCGTGCTCACACCTATGGATATGGTGAAGCAGAGGTTGCAGTTGAGTAATAGTCCGTACAAAGGGGTATGGGATTGTGTGAAGAGGGTTATGAAGGAAGAAGGTTTTGGGTCGTTTTATGCATCTTATAAGACTACGGTTTTGATGAATGCGCCTTTTGTGGCTGTTCACTTTGCCACTTATGAGGCTGCTAAGAAGGGTTTGATGGAGGTTTCGCCTGAGAGTGTTAATGATGAGCAGTGGGTCGTTCATGCTACTGCCGGGGCTGCTGCCGGAGCATTGGCGGCAGTTGTGACCACCCCGCTTGATGTGGTTAAAACACAGTTGCAATGCCAGGGTGTATGTGGATGCGATAGATTCCAAAACGATTCAATTCGGGATGTATTTAAAACGATATTGAAAAAGGATGGATCAAGAGGGCTTATGAGAGGATGGATTCCAAGGATGCTTTTCCACGCTCCCGCTGCCGCAATCTGTTGGTCCACTTATGAAGCTTCTAAATCCTTCTTCCAAGATTTGAACAACAAGAGTAACCCTGACACTATCATCTGA | 990 | 49.8 | MATESTANFQNPDFRPVPSPPDFHPQIMVSSHDGLHFWQYMVAGSIAGSVEHMAMFPVDTVKTHMQALGSCPIKSVGVRQALKSILKREGVAGLYRGIGAMGLGAGPAHAVYFSVYEICKESFSTGNPNNSAVHAVSGVFATVASDAVLTPMDMVKQRLQLSNSPYKGVWDCVKRVMKEEGFGSFYASYKTTVLMNAPFVAVHFATYEAAKKGLMEVSPESVNDEQWVVHATAGAAAGALAAVVTTPLDVVKTQLQCQGVCGCDRFQNDSIRDVFKTILKKDGSRGLMRGWIPRMLFHAPAAAICWSTYEASKSFFQDLNNKSNPDTII | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4648908 | 4651156 | - | Conep05aG0108800.1 | Cone5ag1055 | 438073 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag1055 | 329 | Gene3D | Mitochondrial carrier domain | 21 | 163 | IPR023395 | - | |
Cone5ag1055 | 329 | FunFam | Mitochondrial RNA-splicing protein MRS3 | 164 | 327 | - | - | |
Cone5ag1055 | 329 | Pfam | Mitochondrial carrier protein | 130 | 216 | IPR018108 | - | |
Cone5ag1055 | 329 | Pfam | Mitochondrial carrier protein | 35 | 125 | IPR018108 | - | |
Cone5ag1055 | 329 | Pfam | Mitochondrial carrier protein | 225 | 318 | IPR018108 | - | |
Cone5ag1055 | 329 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cone5ag1055 | 329 | PRINTS | Mitochondrial carrier protein signature | 40 | 53 | IPR002067 | GO:0055085(InterPro) | |
Cone5ag1055 | 329 | PRINTS | Mitochondrial carrier protein signature | 144 | 162 | IPR002067 | GO:0055085(InterPro) | |
Cone5ag1055 | 329 | PRINTS | Mitochondrial carrier protein signature | 53 | 67 | IPR002067 | GO:0055085(InterPro) | |
Cone5ag1055 | 329 | PRINTS | Mitochondrial carrier protein signature | 234 | 256 | IPR002067 | GO:0055085(InterPro) | |
Cone5ag1055 | 329 | PRINTS | Mitochondrial carrier protein signature | 186 | 204 | IPR002067 | GO:0055085(InterPro) | |
Cone5ag1055 | 329 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 35 | 122 | IPR018108 | - | |
Cone5ag1055 | 329 | Gene3D | Mitochondrial carrier domain | 164 | 328 | IPR023395 | - | |
Cone5ag1055 | 329 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 225 | 315 | IPR018108 | - | |
Cone5ag1055 | 329 | SUPERFAMILY | Mitochondrial carrier | 33 | 310 | IPR023395 | - | |
Cone5ag1055 | 329 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 129 | 213 | IPR018108 | - | |
Cone5ag1055 | 329 | PANTHER | MITOFERRIN-1-RELATED | 30 | 318 | - | GO:0015093(PANTHER)|GO:0031966(PANTHER)|GO:0048250(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag1233 | Cone-Chr20:8169237 | Cone5ag1055 | Cone-Chr5:4648908 | 1.60E-22 | dispersed | |
Cone5ag1055 | Cone-Chr5:4648908 | Cone8ag0066 | Cone-Chr8:347083 | 1.81E-38 | dispersed | |
Cone1ag0764 | Cone-Chr1:53748305 | Cone5ag1055 | Cone-Chr5:4648908 | 4.31E-108 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag1055 | K15113 | - | csv:101215924 | 552.362 |