Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1091 ATGCCAGCTATTGCCGGACGCAGGTGCCAGATTGACGAGATTGCGGTTGTCAATGAGAAGACTTGCAAGAGCGGATCCAACGGCGAGGTTACTCCTCAGAAGCGGAAACTGAGATCTCATGCTTCTCCGGTGCAGAAGAGTATCATTTCTACGCCCATGAAATGGAAATCGCCTCGCAGAAGCGTCAATTCCAGCCCTATCAGTCACGCAGATGCAATCGAGAAAGATTCTGGTGAGAAACTTGTTAAGCTGCAGAAATCAACAGTAAAATGCTTGTCAGGGGCCTTCGCTGCTAAACTGAATTGGAACCCGAGAGACTCGGAGCAAATGAAGTTGGTGAAGGAAGCGATGCATGTTTCTACTGCACCATCTACTGTAGTTTGCCGTGAGGGCACTGGAAAATCCTTATCCATGGAAAAAGTGAAACTGCTCTTATTGGATTGGGCAAGAGAAGCTGATGTACCAGTGCCTGATGTTTTGGCCCTAAATTGCACTTCTCTAACAAATACATCAGATATATTCACCAAGATATTAGGTAAAATCCAACCAAGAAAGAGAATAAATGCCTCTTCATCACCCTTACAACATCTTCAGAACTTCTATTCTCAAAGTCCAGAGCCATCTGGCATGAAGATAACGCTGATAATTGCTGATGAATTGGATTACTTAATTACTAAAGACCGAGGGGTGCTTCATGATCTTTTCATGCTTACGACTTTTCCATTCTCCAGATGTATTTTGATAGGTATTGCAAATTCCATAGACCTTGCCGATCGTTTTCTTCCGAGGCTTCAGTCATTAAATTGCAAACCTATGGTTGTAACTTTTAGGGCCTACACTAAAGATCAGATCCTCAAGATCCTTCAAGAAAGGCTAAATGTGCTTCCTTGCACTGTTTTTCATCCACAAGCATTGGAACTTTGTGCCAGAAAAGTTGGAGCTGTATCTGGAGATATGCGGAAGGCCCTTTGTGTTTGCAGAAGTGCTGTGGAATATCTGGAAGCTGAGCTCAGAGAAGCCAGTGGCAACTCAAATCTATCATCTTCAGCAAAAGCATCCACTGAGGAGCAGACAGCTTCTACCCCTGATATTGCGGAAAAACAAGAGATAGTGAGGATTGATCATATGGCGGTTGCATTGTCAAAGACATTTAAATCTTCAGTTGTGGACACAATCCAATCTCTTCCTCAGCATCAACAGATTATCCTTTGTTCGGCCGTGAAGCTTTTCCGTGGGAAGAAGAAAGATGCAAGTTTAGACGAGCTGAATAAATCATACAAGGAGTTCTGCAAATCTGCAAGAATCCCACCAGTTGGAGCATCTGAGCTTGCCAGTATATACAGAGTCCTAAATGACCAGGGGCTTCTTAAACTGGGTCAATCCCGAGATGATAAATTGAAAAGAGTATCACTGAAAGTTGATGAATCCGACATGACCTTTGCATTGCAGGGTATCCGTTTCTTCCGAAACTGCCTTCAGTAA 1482 43.45 MPAIAGRRCQIDEIAVVNEKTCKSGSNGEVTPQKRKLRSHASPVQKSIISTPMKWKSPRRSVNSSPISHADAIEKDSGEKLVKLQKSTVKCLSGAFAAKLNWNPRDSEQMKLVKEAMHVSTAPSTVVCREGTGKSLSMEKVKLLLLDWAREADVPVPDVLALNCTSLTNTSDIFTKILGKIQPRKRINASSSPLQHLQNFYSQSPEPSGMKITLIIADELDYLITKDRGVLHDLFMLTTFPFSRCILIGIANSIDLADRFLPRLQSLNCKPMVVTFRAYTKDQILKILQERLNVLPCTVFHPQALELCARKVGAVSGDMRKALCVCRSAVEYLEAELREASGNSNLSSSAKASTEEQTASTPDIAEKQEIVRIDHMAVALSKTFKSSVVDTIQSLPQHQQIILCSAVKLFRGKKKDASLDELNKSYKEFCKSARIPPVGASELASIYRVLNDQGLLKLGQSRDDKLKRVSLKVDESDMTFALQGIRFFRNCLQ 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4850033 4853561 - Conep05aG0112600.1 Cone5ag1091 438109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1091 493 CDD Cdc6_C 396 478 IPR015163 -
Cone5ag1091 493 MobiDBLite consensus disorder prediction 23 42 - -
Cone5ag1091 493 Gene3D - 269 391 - -
Cone5ag1091 493 Gene3D - 105 268 IPR027417 -
Cone5ag1091 493 SUPERFAMILY Winged helix DNA-binding domain 388 491 IPR036390 -
Cone5ag1091 493 SMART Cdc6_C_2 403 482 IPR015163 -
Cone5ag1091 493 Pfam AAA domain 125 240 IPR049945 GO:0016887(InterPro)
Cone5ag1091 493 FunFam Cell division control protein 268 392 - -
Cone5ag1091 493 Gene3D - 392 482 IPR036388 -
Cone5ag1091 493 MobiDBLite consensus disorder prediction 344 364 - -
Cone5ag1091 493 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 131 488 IPR050311 GO:0003688(PANTHER)|GO:0005634(PANTHER)|GO:0033314(PANTHER)
Cone5ag1091 493 Pfam CDC6, C terminal winged helix domain 390 481 IPR015163 -
Cone5ag1091 493 PIRSF Cdc6 7 130 IPR016314 GO:0006270(InterPro)|GO:0051301(InterPro)
Cone5ag1091 493 PIRSF Cdc6 131 493 IPR016314 GO:0006270(InterPro)|GO:0051301(InterPro)
Cone5ag1091 493 Pfam Cdc6/ORC-like, ATPase lid domain 279 336 IPR054425 -
Cone5ag1091 493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 337 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0580 Cone-Chr1:5826366 Cone5ag1091 Cone-Chr5:4850033 1.15E-234 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1091 K02213 - cit:102615076 603.979