Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag1121 | ATGGCAGAGATTTGTTGTGGAATGATGAGTGATAGTGAAAGTTCGCCGCCGTACGAGCCTATCTCACGAGCGGCTAGGCGGCGGAGAATGGAGATCAGGAGGTTTAAGTTTGTGGCCGGGGTGGCACCGCAGGAGACGGCGGAGAACGAGCAGAAACGCAGGAAGTTTGAGTTCTATGCGGCGTCGCTTCCCGGCTCTGAATGCGATAATGCAGTTCAGGACTCTGGTTCCGATGAAGAAAAACGCGTTACGGTAAAGGTAGGATCGGAGAGCTGTAAGGAGATACAAAATTTGTGTAGTTCTTCGAGCATACCAGAATCGACGTCGATGAGTGAAATTCCCATCCCTGCAACGAGGGATCCAGCTTCTTCCAGAGAGTATCTGAGATTCGGCGTGGCTTCATTATGTGGAAGGAGGAGAGATATGGAAGATGCCGTTGCTCTTCATCCTTCATTTTTCCGGTCAGATGATGAAGATACAGCTCAATTTCATTACTTCGCTGTTTACGATGGCCATGGATGCTCTCATGTGGCGACGAAGTGCAGAGAAAGACTGCACGAGATTGTGAAGGAAGAGATGGAGAGTAAAGAGGAGCCGAGAGGTGGCGGTGAGTGGAAGAGCGTAATGGAGCGAAGTTTTTGCCGGATGGACAAAGAAGTTGTCGCGGTGAATGAGGGAGCGACAGCTGTTGGTAATTGCAGATGTGAGCTTCAGTCGCCGGAGTGCGACGCCGTTGGATCTACTGCCGTCGTTGCAGTCGTTTCTCCTGATAAAATAATCGTCGCTAATTGCGGTGACTCTAGAGCAGTTCTCTGTCGAGATGGAAAGGCTATTCCACTGTCGTCTGATCACAAGCCGGATCGCCCAGATGAGCTAAAACGGATCGAATCTGTGGGTGGGCGGGTCATATACTGGGAGGGTGCTCGGGTTCTCGGTGTTCTTGCCATGTCAAGAGCTATAGGTGATAATTATCTGAAGCCATATGTGAGCTGTGAGCCGGAGATCACGATCACAGATCGGACGGCAGAGGATGAGTGTTTGATAATAGCAAGTGATGGGCTTTGGGATGTGGTATCCAATGAGATGGCATGCGGGGTGGCCCGAATGTGCCTGAGAGGAAGGGGAAACTCGGATGCATTATCCGCAACGGGGAGTGATGTTTCTGGGATAGAGATATCCGATAAGGTATGTAATAACGCATCCATGTTGCTAACGAAACTGGCTTTGGCTAGGCACAGTTCGGACAACGTTAGCGTGGCTGTCGTAGACCTTAGGAAGGATAATGTGGCCTAA | 1293 | 50.5 | MAEICCGMMSDSESSPPYEPISRAARRRRMEIRRFKFVAGVAPQETAENEQKRRKFEFYAASLPGSECDNAVQDSGSDEEKRVTVKVGSESCKEIQNLCSSSSIPESTSMSEIPIPATRDPASSREYLRFGVASLCGRRRDMEDAVALHPSFFRSDDEDTAQFHYFAVYDGHGCSHVATKCRERLHEIVKEEMESKEEPRGGGEWKSVMERSFCRMDKEVVAVNEGATAVGNCRCELQSPECDAVGSTAVVAVVSPDKIIVANCGDSRAVLCRDGKAIPLSSDHKPDRPDELKRIESVGGRVIYWEGARVLGVLAMSRAIGDNYLKPYVSCEPEITITDRTAEDECLIIASDGLWDVVSNEMACGVARMCLRGRGNSDALSATGSDVSGIEISDKVCNNASMLLTKLALARHSSDNVSVAVVDLRKDNVA | 430 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4987859 | 4990057 | - | Conep05aG0115700.1 | Cone5ag1121 | 438139 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag1121 | 430 | SUPERFAMILY | PP2C-like | 121 | 425 | IPR036457 | - | |
Cone5ag1121 | 430 | ProSiteProfiles | PPM-type phosphatase domain profile. | 129 | 424 | IPR001932 | - | |
Cone5ag1121 | 430 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cone5ag1121 | 430 | Pfam | Protein phosphatase 2C | 129 | 388 | IPR001932 | - | |
Cone5ag1121 | 430 | SMART | PP2C_4 | 119 | 422 | IPR001932 | - | |
Cone5ag1121 | 430 | CDD | PP2Cc | 129 | 424 | IPR001932 | - | |
Cone5ag1121 | 430 | PANTHER | PROTEIN PHOSPHATASE | 93 | 423 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cone5ag1121 | 430 | Gene3D | - | 124 | 429 | IPR036457 | - | |
Cone5ag1121 | 430 | FunFam | Protein phosphatase 2C 37 | 124 | 430 | - | - | |
Cone5ag1121 | 430 | ProSitePatterns | PPM-type phosphatase domain signature. | 165 | 173 | IPR000222 | GO:0043169(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone5ag1121 | Cone-Chr5:4987859 | Cone9ag0849 | Cone-Chr9:4151370 | 1.54E-81 | dispersed | |
Cone5ag0824 | Cone-Chr5:3528752 | Cone5ag1121 | Cone-Chr5:4987859 | 1.42E-57 | transposed | |
Cone1ag0610 | Cone-Chr1:5960182 | Cone5ag1121 | Cone-Chr5:4987859 | 1.27E-277 | wgd | |
Cone1ag1257 | Cone-Chr1:56127181 | Cone5ag1121 | Cone-Chr5:4987859 | 1.90E-146 | wgd | |
Cone5ag0241 | Cone-Chr5:1020716 | Cone5ag1121 | Cone-Chr5:4987859 | 7.68E-143 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag1121 | K14497 | - | vvi:100255251 | 493.812 |