Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1134 ATGGATCAGTATTATGGAGAATACCCAGATCATATTAATGGTCTCGAAGCCAACGATCATGCACTCTTACTTAATCCAGATGAGTTCTTAAATCTTCCTGATGACCGGATCCACTTGCCCGAATCGAACCCCTATGGTTTCGGGTTTGACCAAAAATCTCTGGATGTCAATTTCATTGAAAACTCCCTCTCTTTAGACGATCTAGATCCATCTAGCTTTGATCTGCCCAAAACTGTGAGCCCCAATGGGCCCATCTCCACCTTACCTTCTGGTTTGAGTCCGGGCGCTGGCTCACCGTCCTCGGACGACAGTGAATTCTCAGAAACCGTTCTTAAGTATATGACCCAAATCCTCATGGAAGAGAACATGGAAGAAAAGCCGTCCATGTTTTTCGACCCACTAGGTCTTAGAGATACCGAGAAGTCGTTCTATGATGTTATCGGAACAAAGTACCCATCACAAAATCCTTCCCCTCTTTTTTCCAAAAGCCCAAAAGATGCCATTTCTCCTGGTAGTAGTGATCGTTATGGTAGCAGCAGTATTACTACTTCCAGTACTAGCAACTCTACTCAGAGTTTCCAGCCTGATTTGCAGCCCACTTCCCAGTTTTCTATCTACAATCAAAACAGCGTGACTAGTTCTAATGGTGATGATCTGGTTTCCGAGCTCTTATCTCGGAGTATTTTCAGTGAAAGTGAATCTGCCTTGCAGTTCAAGAAAGGGTTAGAAGAGGCAAGTAAGTTCCTTCCGGGAAATGATCCCCTGAATCTCGATCTAGAGAGAAGTGGGCTCAAGTGGGTAGAGAATACCAATGGAGAGGAGAAGGAGAGGGAGAGGGAGATTTCAGCAAACGGATCTGCAAGAGGAAGGAAAAGAGAAGAAATGGATTTGGATTCACAAGAAGAGAGGAATAATAAACAATCAGCTGTTCACAAGGACGAGGAGGACATATTAGAATTGTTCGACCATGTCTTGCTTTTTAAGAAAGAACCGCACGGAATCTGTTGTGAAACCGAAGCTCCTCAACCGTCTGATCATTCTCAAGGATCATCATCATCCAATGGTGGAAAACCAAAAGGGAAAAAACGAGGGAAGCGAAAGGAAACTGTGGATTTAAGGTCCCTTCTGATTCTATGCGCACAAGCTGTTTCAACCGATGATAGAAGAACTGCTAACGAGCTCTTGAAGCAAATAAGGCAGAATTCGAGCACATTTGGAGACGGATCCCAGAGACTGGCCCATTATTTTGCCAATGCCCTTGAGGCCCGCATGGCCGGAACCGGTACTGGAACCAAACTCTTTTTCTCTTCCCTGACGAACAAGAACACATCAGCTGCTGACATATTAAGATCTTATCAAGTCCATCTCTCGGCCTGCCCTTTTAAGAAGACCTCGATTTTCTTTGCTTGCAAAATGATCCTAAAAGCCGCCCAGAAAGCCAAAACCCTTCACATTGTAGATTTTGGAATCAGTTACGGATTCCAATGGCCAATCCTGATCCAGAAACTGTCACAATTTCCCGGTGAGCCCCCCAAGCTCCGAATCACAGGAATCGAGTTTCCTCTTCCTGGATTCCGTCCCTCAGAAAGAATTGAGGAAACGGGTCGTCGGTTGGGAAAGTACTGTGAACGGTTTAATGTTCCCTTTGAATATAATGCGATTGCATCGGCAAATTGGGAAAACATCAAAATTGAGGAATTAAAACTTGATAAAGATGAAGTGCTTGCCGTGAACACTTTTTACCGGTTCAAGAACCTACTTGACGAGACAGTTGAAGAGACTAGTCCGAGAAATTCAGTTCTGGAATTGATCAAGAAGATGAACCCGAACATCTTCGTTCAATCTGTTTGTAATGGATCATACAATGCCCCATTCTTTGTGACGAGATTCCGAGAAGCACTGTTCCATTTCTCAGCTTTGTACGATATGTTTGATACAAATATTCCTCGGGAATGTGAAGAGAGGATGATGTTCGAGAGAGAAATCTATGGACGAGAGGCAATGAATGTGATAGCGTGTGAAGGGCTGGAAAGGGTTGAACGGCCCGAGACTTATAAGCTGTGGCGGGTCCGGTGTAATCGGGCTGGGTTTAAGTCGATTCCTTTGGACCGAGAGCTTATGGATATATTTAGGCAGAAGTTGAAGTTATACTATCATAAGGATTTTGTGCTTGATGAAGACAATGATTGGATGCTTCACGGATGGAAAGGCCGGATTACTTATGCATCTACTTGTTGGGTCCCGGCATAG 2250 44.31 MDQYYGEYPDHINGLEANDHALLLNPDEFLNLPDDRIHLPESNPYGFGFDQKSLDVNFIENSLSLDDLDPSSFDLPKTVSPNGPISTLPSGLSPGAGSPSSDDSEFSETVLKYMTQILMEENMEEKPSMFFDPLGLRDTEKSFYDVIGTKYPSQNPSPLFSKSPKDAISPGSSDRYGSSSITTSSTSNSTQSFQPDLQPTSQFSIYNQNSVTSSNGDDLVSELLSRSIFSESESALQFKKGLEEASKFLPGNDPLNLDLERSGLKWVENTNGEEKEREREISANGSARGRKREEMDLDSQEERNNKQSAVHKDEEDILELFDHVLLFKKEPHGICCETEAPQPSDHSQGSSSSNGGKPKGKKRGKRKETVDLRSLLILCAQAVSTDDRRTANELLKQIRQNSSTFGDGSQRLAHYFANALEARMAGTGTGTKLFFSSLTNKNTSAADILRSYQVHLSACPFKKTSIFFACKMILKAAQKAKTLHIVDFGISYGFQWPILIQKLSQFPGEPPKLRITGIEFPLPGFRPSERIEETGRRLGKYCERFNVPFEYNAIASANWENIKIEELKLDKDEVLAVNTFYRFKNLLDETVEETSPRNSVLELIKKMNPNIFVQSVCNGSYNAPFFVTRFREALFHFSALYDMFDTNIPRECEERMMFEREIYGREAMNVIACEGLERVERPETYKLWRVRCNRAGFKSIPLDRELMDIFRQKLKLYYHKDFVLDEDNDWMLHGWKGRITYASTCWVPA 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5088153 5090402 - Conep05aG0117000.1 Cone5ag1134 438152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1134 749 MobiDBLite consensus disorder prediction 75 106 - -
Cone5ag1134 749 MobiDBLite consensus disorder prediction 270 312 - -
Cone5ag1134 749 MobiDBLite consensus disorder prediction 341 357 - -
Cone5ag1134 749 MobiDBLite consensus disorder prediction 74 106 - -
Cone5ag1134 749 MobiDBLite consensus disorder prediction 154 198 - -
Cone5ag1134 749 Pfam GRAS domain family 372 746 IPR005202 -
Cone5ag1134 749 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 332 746 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cone5ag1134 749 ProSiteProfiles GRAS family profile. 363 747 IPR005202 -
Cone5ag1134 749 MobiDBLite consensus disorder prediction 336 367 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0630 Cone-Chr1:6099453 Cone5ag1134 Cone-Chr5:5088153 0 dispersed
Cone5ag1134 Cone-Chr5:5088153 Cone7ag1080 Cone-Chr7:8204358 1.29E-193 dispersed
Cone5ag1134 Cone-Chr5:5088153 Cone5ag1135 Cone-Chr5:5091380 1.05E-185 tandem
Cone1ag0629 Cone-Chr1:6095291 Cone5ag1134 Cone-Chr5:5088153 1.70E-151 wgd
Cone1ag1271 Cone-Chr1:56198858 Cone5ag1134 Cone-Chr5:5088153 3.81E-186 wgd
Cone10ag0315 Cone-Chr10:1500281 Cone5ag1134 Cone-Chr5:5088153 2.39E-198 wgd
Cone13ag1347 Cone-Chr13:9890450 Cone5ag1134 Cone-Chr5:5088153 1.06E-29 wgd
Cone19ag1332 Cone-Chr19:8911519 Cone5ag1134 Cone-Chr5:5088153 1.03E-196 wgd
Cone3ag0346 Cone-Chr3:1764971 Cone5ag1134 Cone-Chr5:5088153 4.56E-17 wgd
Cone4ag1048 Cone-Chr4:9129371 Cone5ag1134 Cone-Chr5:5088153 1.22E-153 wgd
Cone5ag0258 Cone-Chr5:1097559 Cone5ag1134 Cone-Chr5:5088153 1.31E-183 wgd
Cone5ag1134 Cone-Chr5:5088153 Cone7ag1079 Cone-Chr7:8200464 6.37E-213 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46177 PF00294 PfkB 1.40E-74 CL0118 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1134 K27753 - cit:102623679 737.643