Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1153 ATGGCAGAAGCTGAGGATATTCAGCCACTTGTCTGTGATAATGGAACTGGAATGGTCAAGGCTGGGTTTGCTGGAGATGATGCTCCAAGAGCTGTTTTCCCTAGCATTGTGGGTCGCCCACGTCACACGGGAGTAATGGTTGGCATGGGTCAGAAAGATGCATATGTTGGTGATGAAGCTCAGTCCAAGCGTGGTATATTGACTTTGAAGTACCCCATTGAGCATGGAATTGTGAGCAATTGGGATGACATGGAAAAGATCTGGCATCACACCTTCTACAATGAACTCCGTGTGGCCCCTGAAGAACACCAGTTCTACTCACTGAAGCACCTCTTAACCCAAAGGCTAACCGTGAAAAGATGA 363 47.66 MAEAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHQFYSLKHLLTQRLTVKR 120
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5193356 5193861 - Conep05aG0119100.1 Cone5ag1153 438171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1153 120 FunFam Actin, alpha skeletal muscle 36 73 - -
Cone5ag1153 120 Pfam Actin 5 105 IPR004000 -
Cone5ag1153 120 SUPERFAMILY Actin-like ATPase domain 5 106 IPR043129 -
Cone5ag1153 120 FunFam Actin, alpha skeletal muscle 3 115 - -
Cone5ag1153 120 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Cone5ag1153 120 Gene3D Actin; Chain A, domain 2 36 73 - -
Cone5ag1153 120 PRINTS Actin signature 51 62 IPR004000 -
Cone5ag1153 120 PRINTS Actin signature 28 37 IPR004000 -
Cone5ag1153 120 PRINTS Actin signature 63 85 IPR004000 -
Cone5ag1153 120 PANTHER ACTIN 8 106 IPR004000 -
Cone5ag1153 120 Gene3D - 4 119 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0933 Cone-Chr12:8147612 Cone5ag1153 Cone-Chr5:5193356 8.20E-37 dispersed
Cone5ag1153 Cone-Chr5:5193356 Cone8ag0048 Cone-Chr8:258605 1.04E-71 dispersed
Cone5ag1153 Cone-Chr5:5193356 Cone12ag0043 Cone-Chr12:262455 1.04E-71 transposed
Cone5ag1153 Cone-Chr5:5193356 Cone13ag0532 Cone-Chr13:5595558 1.04E-71 transposed
Cone5ag1153 Cone-Chr5:5193356 Cone19ag0481 Cone-Chr19:3952694 1.04E-71 transposed
Cone5ag1153 Cone-Chr5:5193356 Cone8ag0044 Cone-Chr8:248787 1.04E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1153 K10355 - mdm:103418811 219.55