Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1186 ATGGGTCATAGAAGACTAGAATTCAGCATCTGGGTCCTATCCATTTTCTGTTTAACTTGGATTTCTAGTGGGTTCAATCCAGTAGACAATTACCTTATAGATTGTGGATCATCCGCCAATACTTCGGTTGGTCAGAGAATCTTCTCTTCCGATGATTCCGCCTCAAAATATCTTTCAACCCCTCAAGACATACTTGCTAAGAACGCCACCTCTTGGAGCTCTACTTCCAATTCATCTAATAATGCACTATATCAAACTGCAAGAGTTTTTACTGCAGCTTCTAAGTATACGTTTCCAATCAAGCAGATCGGAAGGCATTGGATCCGCCTTTACTTCTACCCGTTTTCATATTCCGGTTACAATTTAACCTCTGCCCATTTTTCCATATCAACCCAAAACCATGTCCTTGTCACCAATTTCGCTCCCCCTCAAACCCTCCTGGTCAAGGAATTTTCCATCAATCTAACCTCAGACTCCCTCGTAATTACGTTCACACCATCACAGAATTCCTTTGCATTCTTGAACGGAATCGAAGTAGTGTCCATTCCAGACACGATCATAACAGATGATGCGATGAAAGTCAACCCGCGCAGTCAATTCCAAGGGTTGTTAACTCAAGCATTAGAGACAGTTGCCCGCGTCAACATGGGCGGACCCCAGGTGACATCTGACTCCGATACTCTCTGGCGAAACTGGGTCCCGGACCAATCCTTTCTGGTCCAAAAAAACTTGGCGAAAAACTTTTCAAACATTCCAGCTGTCAAATACATTCCAGGAGGGGCAACTGAAGATATTGCTCCAGATTCTGTTTATGGGACTGTCTCCGAAATGAACTCAGAAGCTGACCCGAATTCCAATTTCAATGTGACGTGGCAGTTTGAGGTGGACCCTGGATTCCAGTACCTTGTCCGGCTTCACTTTTGCGATATAGTGAGTCAATCTCTTAATGAACTTTACTTCTCTATTTACCTCGACTCATATATTGTCATCCAGGATTTTGATCTCTCTTCACTAACTAATGCTCTAGCCGCTGCTTATTACGTGGATGTTGTTTCAATGGTAACTAGTAGTAACCTGATCCGGGTTAGTATTGGTCCGTCTAGTTTATCCGCTAATAACCCTGATGCCATTCTGAATGGATTGGAGCTAATGAAGATGAACAATTCGGAAGGTAGTCTTGCCGGAGTGGGAGGGTATATTGGTAGTTCTTCGGATTCAAGTTCGAATAACAAGAGTGTTGGTGTAATAGTTGGAGTAAGTGTTGGAGCGATTATTGCTGTTATATTGTTAGGGATTCTGTTCATATGCTGTAGAAAGAGAAGACGGGAGATGCTCCTTGCCCAGTCTAAAACGTGGATTCCGTTATCGATCAATGGTGGAAATTCACACACCATGGGGAGTAAATATTCAAACGGAACGATCATGAGCATTGGTTCAAACTATGGGTATAGGATCCCATTCCTTGCTGTTCAAGAAGCTACAAATAATTTCGACGAAAATTGGGTTATAGGGATAGGCGGGTTTGGAAAAGTATACAAGGGAGTTCTAAGTGAAGGAACGAAAGTAGCCGTTAAGAGGGGAAACCCTAAATCCCAACAGGGATTAGCCGAGTTTCAAACCGAAATCGAAATGCTGTCTCAATTCCGGCATAGACATCTTGTCTCACTTATTGGGTATTGTGATGAAAAGAATGAAATGATCTTGGTTTATGAGTACATGGAGAATGGGACCTTAAAGGCTCATTTATATGGCTCGAATCTTCCAAGCTTGAGTTGGAAGGATAGGCTCGAAATATGCATAGGATCGGCTAGAGGGCTTCATTATCTTCACACGGGTTATGCAAAACCGGTCATTCATCGGGATGTTAAATCTGCTAATATCCTGCTTGATGAGAAGCTGATGGCTAAGGTTGCCGATTTTGGGCTTTCAAAAACTGGGCCCGAAATCGACCAGACCCATGTTAGTACTGCGGTGAAGGGTAGTTTCGGGTACTTAGATCCGGAATATTTTAGACGGCAACAGTTGACAGAAAAGTCCGACGTGTATTCTTTTGGAGTTGTGTTGTTCGAGGTGCTTTGTGCTAGGCCTGTTATAGACCCGTCTCTTCCTAGAGAAATGGTGAATTTAGCAGAATGGGCCATGAAGTGGCAGAAGAAAGGGCAATTGGGCCACATTATTGACCCGACTTTAGTTGGGAAAGTGAAACCGGATTCGTTAAGGAAGTTTGGGGAGACTGCTGAGAAGTGCTTGGCAGATTATGGTGTGGACCGGCCCTCTATGGGAGATGTGTTGTGGAATCTCGAATATGCCTCTCAGTTGCATGAAACAGTGTTGGAAGGAGAAGGACAAGAGGAGAATAGTACAAATATGATTGGGGAGCTTTCGCCTCAAGTTAATAATTTCAATCTGGTTGACAATTCAGGTGTTGATTTGGGTACGGATTTTAATCAAGTTCCTGGAGTTGATGATCTTTCTGGGGTTTCTATGAGCCAGGTTTTCTCTCAGCTGGTTAAATCTGAGGGAAGGTAA 2529 43.38 MGHRRLEFSIWVLSIFCLTWISSGFNPVDNYLIDCGSSANTSVGQRIFSSDDSASKYLSTPQDILAKNATSWSSTSNSSNNALYQTARVFTAASKYTFPIKQIGRHWIRLYFYPFSYSGYNLTSAHFSISTQNHVLVTNFAPPQTLLVKEFSINLTSDSLVITFTPSQNSFAFLNGIEVVSIPDTIITDDAMKVNPRSQFQGLLTQALETVARVNMGGPQVTSDSDTLWRNWVPDQSFLVQKNLAKNFSNIPAVKYIPGGATEDIAPDSVYGTVSEMNSEADPNSNFNVTWQFEVDPGFQYLVRLHFCDIVSQSLNELYFSIYLDSYIVIQDFDLSSLTNALAAAYYVDVVSMVTSSNLIRVSIGPSSLSANNPDAILNGLELMKMNNSEGSLAGVGGYIGSSSDSSSNNKSVGVIVGVSVGAIIAVILLGILFICCRKRRREMLLAQSKTWIPLSINGGNSHTMGSKYSNGTIMSIGSNYGYRIPFLAVQEATNNFDENWVIGIGGFGKVYKGVLSEGTKVAVKRGNPKSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILVYEYMENGTLKAHLYGSNLPSLSWKDRLEICIGSARGLHYLHTGYAKPVIHRDVKSANILLDEKLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLGHIIDPTLVGKVKPDSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYASQLHETVLEGEGQEENSTNMIGELSPQVNNFNLVDNSGVDLGTDFNQVPGVDDLSGVSMSQVFSQLVKSEGR 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5339864 5343302 + Conep05aG0122600.1 Cone5ag1186 438204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1186 842 Gene3D Transferase(Phosphotransferase) domain 1 573 791 - -
Cone5ag1186 842 ProSiteProfiles Protein kinase domain profile. 497 777 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1186 842 CDD STKc_IRAK 503 768 - -
Cone5ag1186 842 PANTHER OS03G0124300 PROTEIN-RELATED 6 441 IPR045272 GO:0004714(InterPro)|GO:0006468(InterPro)
Cone5ag1186 842 Pfam Malectin-like domain 33 385 IPR024788 -
Cone5ag1186 842 FunFam Receptor-like protein kinase FERONIA 573 789 - -
Cone5ag1186 842 FunFam receptor-like protein kinase FERONIA 461 572 - -
Cone5ag1186 842 SUPERFAMILY Protein kinase-like (PK-like) 472 770 IPR011009 -
Cone5ag1186 842 FunFam Putative receptor-like protein kinase 30 183 - -
Cone5ag1186 842 SMART serkin_6 497 770 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1186 842 Gene3D - 206 388 - -
Cone5ag1186 842 Gene3D - 30 182 - -
Cone5ag1186 842 Pfam Protein tyrosine and serine/threonine kinase 502 693 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone5ag1186 842 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524(InterPro)
Cone5ag1186 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone5ag1186 842 FunFam Receptor-like protein kinase FERONIA 207 388 - -
Cone5ag1186 842 Gene3D Phosphorylase Kinase; domain 1 461 572 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1187 Cone-Chr1:55835531 Cone5ag1186 Cone-Chr5:5339864 4.04E-236 dispersed
Cone5ag0887 Cone-Chr5:3815717 Cone5ag1186 Cone-Chr5:5339864 7.17E-259 dispersed
Cone5ag1186 Cone-Chr5:5339864 Cone6ag0119 Cone-Chr6:572346 1.00E-282 dispersed
Cone1ag0678 Cone-Chr1:6360381 Cone5ag1186 Cone-Chr5:5339864 0 wgd
Cone1ag1326 Cone-Chr1:56415284 Cone5ag1186 Cone-Chr5:5339864 2.36E-253 wgd
Cone5ag0310 Cone-Chr5:1304876 Cone5ag1186 Cone-Chr5:5339864 2.11E-280 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82869 PF00067 p450 3.20E-24 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1186 - - - 0.0