Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag1231 | ATGGCGAAAGACATAGAGGTGACAGAGCCAGCCGAGTACGCGGCGAAGGACTACCAGGACCCGCCGCCAGCGCCGCTCGTCGACGTGGAGGAGCTGACGAAGTGGTCGTTTTACAGAGCTTTGATAGCAGAGTTTATAGCGACGCTTTTGTTCCTTTACATAACCGTTTTGACCGTTATTGGTTACAAAAGTCAGACTGTTCCGACCAACGATCCTTGCGCCGGAGTCGGCATCCTCGGAATTGCATGGGCCTTTGGCGGCATGATCTTTGTCCTCGTTTACTGCACCGCCGGTATTTCGGGAGGGCATATTAACCCGGCTGTAACTTTCGGGCTATTTCTAGCGCGCAAGGTGTCACTCATCCGTGCGGTCTTGTACATGGTAGCACAGTGTTTAGGTGCTATCTCGGGTGTGGGATTGGTCAAGGCGTTCCAGAAGTCGTACTACGACCGGTATGGAGGTGGGGCCAACGAGCTATCGCCTGGATACAACAAAGGAACTGGTTTAGGGGCTGAGATCATCGGAACCTTTGTTCTTGTCTACACCGTCTTCTCAGCCACTGATCCTAAGAGGAATGCACGAGACTCCCATGTTCCCGTGTTGGCCCCACTTCCTATTGGATTTGCTGTTTTCATTGTTCACTTGGCCACAATCCCAATCACTGGGACTGGAATCAACCCTGCCAGAAGCTTTGGAGCTGCCGTGATTTACAACAAAGAGAAGGCTTGGGATGATCAATGGATATTCTGGGTGGGGCCATTTATTGGAGCAGCAATAGCTGCAATCTATCACCAATACATATTGAGAGCAGGAGCAATTAAGGCACTTGGGTCTTTCAGGAGCAATGCATAA | 852 | 51.06 | MAKDIEVTEPAEYAAKDYQDPPPAPLVDVEELTKWSFYRALIAEFIATLLFLYITVLTVIGYKSQTVPTNDPCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAISGVGLVKAFQKSYYDRYGGGANELSPGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAIYHQYILRAGAIKALGSFRSNA | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 5673499 | 5675189 | - | Conep05aG0127100.1 | Cone5ag1231 | 438249 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag1231 | 283 | Pfam | Major intrinsic protein | 31 | 264 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag1231 | 283 | SUPERFAMILY | Aquaporin-like | 30 | 269 | IPR023271 | - | |
Cone5ag1231 | 283 | CDD | MIP | 39 | 267 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag1231 | 283 | PRINTS | Major intrinsic protein family signature | 207 | 229 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag1231 | 283 | PRINTS | Major intrinsic protein family signature | 122 | 141 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag1231 | 283 | PRINTS | Major intrinsic protein family signature | 85 | 109 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag1231 | 283 | PRINTS | Major intrinsic protein family signature | 39 | 58 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag1231 | 283 | PRINTS | Major intrinsic protein family signature | 171 | 189 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag1231 | 283 | PRINTS | Major intrinsic protein family signature | 247 | 267 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag1231 | 283 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 11 | 281 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Cone5ag1231 | 283 | Gene3D | Glycerol uptake facilitator protein. | 24 | 283 | IPR023271 | - | |
Cone5ag1231 | 283 | FunFam | Probable aquaporin PIP1-2 | 24 | 283 | - | - | |
Cone5ag1231 | 283 | NCBIfam | MIP family channel protein | 43 | 263 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag1231 | 283 | ProSitePatterns | MIP family signature. | 103 | 111 | IPR022357 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0252 | Cone-Chr10:1213414 | Cone5ag1231 | Cone-Chr5:5673499 | 6.01E-182 | dispersed | |
Cone12ag1237 | Cone-Chr12:9577496 | Cone5ag1231 | Cone-Chr5:5673499 | 1.37E-160 | dispersed | |
Cone3ag0280 | Cone-Chr3:1462429 | Cone5ag1231 | Cone-Chr5:5673499 | 2.83E-83 | dispersed | |
Cone5ag1177 | Cone-Chr5:5280620 | Cone5ag1231 | Cone-Chr5:5673499 | 3.39E-33 | dispersed | |
Cone5ag1231 | Cone-Chr5:5673499 | Cone8ag1291 | Cone-Chr8:10585800 | 4.84E-161 | dispersed | |
Cone1ag0730 | Cone-Chr1:6731374 | Cone5ag1231 | Cone-Chr5:5673499 | 4.18E-197 | wgd | |
Cone1ag1352 | Cone-Chr1:56550924 | Cone5ag1231 | Cone-Chr5:5673499 | 1.84E-176 | wgd | |
Cone18ag0517 | Cone-Chr18:2534956 | Cone5ag1231 | Cone-Chr5:5673499 | 7.25E-180 | wgd | |
Cone5ag0337 | Cone-Chr5:1440129 | Cone5ag1231 | Cone-Chr5:5673499 | 1.57E-176 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag1231 | K09872 | - | mdm:103447881 | 515.383 |