Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1291 ATGGACCATGATCTGACAGATCTCGCTGATCGTTCTGGGATGAGATTTTCAGTTCCTCAGATTAAGTGCTACATGAAATCAAGCTCTAATCTTCTTATAGACAATGATGGATATTTGAAGCTTGCAGATTTTGGGCTTGCTAGGTCGTTCTCTAATGATCACAATGCTTATCTTACGAACCGTGTAATAACTTTGTGGTATATGCCTCCAGAATTGCTACTTTGGACAACAAGGTATGGCCCCGCTGTTGATATGTGGTCTGTTGGTTGTATCTTTGCCGAACTTCTTCATGGGAAACCGATTTTCCCAGGTAAAGATGAGCCTGAGCAATTAAATAAGATCTTTGACTTGTGTGAAACCGTAGATGAGCTTAATTGGCCCAGGGTTTCCAAGATTCCTTGGTATAACAATTTGAAACCTTCAAGGCCGATGAAGAGAAGACTTAGAGAGGTTTTCAGGGATTTTGACCGTCATGCTTTAGAGTTGTTGGAGGGGATGCTGACTCTTGATCCCTCTCCGAGGATATCTGCAAAGGGTGCTCTTGATGTTGACTACTTTTGGACTGACCGATTACCATGTGATCCCAAGAGTTTACCCAAATGTGAATCATCCCATGAGTTCCAAACCAAGAAAAACGGCAGCAGCAAAGACAACAGGAAGAAAACGCAAAACGTCAGAAATTGCAACACACACAACAACACACCCGCCTTCCACCACTCCAGCAGTCGGGTCAAGCCCATGCCCAATTACGGCCTGTCCCAAACCAGCCATTGCATAGCTCTCAACCCCCTGTTGCTGCAGGGGGCCCTGGGGGCCACCATTTTGGAAAGCCTTGTGGTGGCCCTCAGGTGGGCCAGGCCGGTATCCACCAAGTGCAAATCCCGCCAGACAATACAACCATCCAATCGTGGTGGTTGA 918 46.51 MDHDLTDLADRSGMRFSVPQIKCYMKSSSNLLIDNDGYLKLADFGLARSFSNDHNAYLTNRVITLWYMPPELLLWTTRYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFDLCETVDELNWPRVSKIPWYNNLKPSRPMKRRLREVFRDFDRHALELLEGMLTLDPSPRISAKGALDVDYFWTDRLPCDPKSLPKCESSHEFQTKKNGSSKDNRKKTQNVRNCNTHNNTPAFHHSSSRVKPMPNYGLSQTSHCIALNPLLLQGALGATILESLVVALRWARPVSTKCKSRQTIQPSNRGG 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7206336 7208436 - Conep05aG0133300.1 Cone5ag1291 438309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1291 305 SUPERFAMILY Protein kinase-like (PK-like) 1 194 IPR011009 -
Cone5ag1291 305 SMART serkin_6 1 186 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1291 305 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1291 305 Gene3D Transferase(Phosphotransferase) domain 1 3 227 - -
Cone5ag1291 305 MobiDBLite consensus disorder prediction 225 244 - -
Cone5ag1291 305 FunFam Cyclin-dependent kinase C-2 27 227 - -
Cone5ag1291 305 PANTHER CELL DIVISION PROTEIN KINASE 29 186 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cone5ag1291 305 Pfam Protein kinase domain 29 186 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1291 305 MobiDBLite consensus disorder prediction 200 224 - -
Cone5ag1291 305 MobiDBLite consensus disorder prediction 200 244 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0846 Cone-Chr3:4340825 Cone5ag1291 Cone-Chr5:7206336 1.70E-126 dispersed
Cone5ag1291 Cone-Chr5:7206336 Cone9ag0171 Cone-Chr9:760275 6.81E-65 dispersed
Cone1ag1406 Cone-Chr1:56782156 Cone5ag1291 Cone-Chr5:7206336 3.65E-37 wgd
Cone1ag0408 Cone-Chr1:3554336 Cone5ag1291 Cone-Chr5:7206336 5.79E-132 wgd
Cone5ag0397 Cone-Chr5:1698040 Cone5ag1291 Cone-Chr5:7206336 5.12E-37 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82877 PF00450 Peptidase_S10 7.40E-131 CL0028 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1291 K08819 - csv:101220936 379.793