Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone5ag1312 | ATGGGTGTCTCAGGGAAATGGATCAAAACGTTAATTGGTTTAAAGAAATCAGAAAAGCCAAAGTCTTGGAAGAAGGATGAAAATAGGACAGATAATACCAAGCTTGGGCTTAGGAGAAGTCACTCTGTTGAAATCGATGCTGAAAAAATTCATTATGAGTTTGATGGTAGTGCTGTTCAACTTGTTGGAGATGCTACTATTCCTTCAAATCCTAATGCTGCTGGTTTGCCTTCGGATTCCCTCCACATACATGATGTGTCATATAGCCAACAGAATGATAGGGAAGAGTGGGCTGCAGTACGCATCCAAACAGGATTTAGGGGATTTCTGGCTAGAAGAGATCTCCGAGCATTGAAGGGATTGGTAAGACTCCAGGCTCTCGTCAGAGGCCATGCTGTGAGAAAACAAGCTGCTATAACTCTTCGTTGCATGCAAGCATTGGTAAGAGTTCAGGCTCGGGTCAGAGCAAGGCATGTTCGTCTTGCATTGGAAAGTCAAACAGCGCCGCAAAATATTGAAGAACAACTTCCAAATGAAGCTCATGGAAAACAAATAGAAGAAGGGTGGTGTGACAGTGTGGGTTCCGTTGAAGAAATTCAAGCCAAGTTGTTAAAGAGGCAGGAGGCTGAGGCCAAGCGTGAGAGAGCCATGGCATATGCCCTGACTCATCAGTGGCAAGCCAGATCAAGGCAGCAAGCTCATCCTCTCAGGTTTGAACCAGATAAAAACAGCTGGGGTTGGAATTGGCTGGAAAGATGGATGGCTGTGCGTCCATGGGAAAATCGCTTTCTTGATACAAATGTCAATGATGGAGTGATAGTACTTGAGAATGGATCATCCCAGGGAAAAAACGGAATCATCACCCCACTAAAAATTCCAGGCAAAAAACCAATTGTTTCAACTCTGCATACAAATCTCTCAAGTCAGAAAACCGTTCCTTCTCATTCAGATAAAGCCAACTCTGGATCAGGCATAAATTCTAGGTCACAGAGCAATCCAAAAGAGAGATCCATTCAACCTGACAAACAGGCAAAGAAGCGGCTGTCTCTACCTAGTAGTACCGGGGGGCCTCCATATAATAAAACATCCCGGGACTCGAGCAAAACAGCTGTCAAAGCAACACCAAGCTCTCTAAAGCCCATGAAGGAAAAATTGAAGCTTAACGGAGGATCAGATTCGGACCCCACAAAACCCACTACACATGCCTCTGATGTATAA | 1218 | 44.5 | MGVSGKWIKTLIGLKKSEKPKSWKKDENRTDNTKLGLRRSHSVEIDAEKIHYEFDGSAVQLVGDATIPSNPNAAGLPSDSLHIHDVSYSQQNDREEWAAVRIQTGFRGFLARRDLRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARHVRLALESQTAPQNIEEQLPNEAHGKQIEEGWCDSVGSVEEIQAKLLKRQEAEAKRERAMAYALTHQWQARSRQQAHPLRFEPDKNSWGWNWLERWMAVRPWENRFLDTNVNDGVIVLENGSSQGKNGIITPLKIPGKKPIVSTLHTNLSSQKTVPSHSDKANSGSGINSRSQSNPKERSIQPDKQAKKRLSLPSSTGGPPYNKTSRDSSKTAVKATPSSLKPMKEKLKLNGGSDSDPTKPTTHASDV | 405 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 7581605 | 7585386 | + | Conep05aG0135400.1 | Cone5ag1312 | 438330 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone5ag1312 | 405 | MobiDBLite | consensus disorder prediction | 346 | 374 | - | - | |
| Cone5ag1312 | 405 | Pfam | IQ calmodulin-binding motif | 97 | 116 | IPR000048 | GO:0005515(InterPro) | |
| Cone5ag1312 | 405 | MobiDBLite | consensus disorder prediction | 306 | 405 | - | - | |
| Cone5ag1312 | 405 | ProSiteProfiles | IQ motif profile. | 119 | 146 | - | - | |
| Cone5ag1312 | 405 | ProSiteProfiles | IQ motif profile. | 95 | 123 | - | - | |
| Cone5ag1312 | 405 | PANTHER | IQ-DOMAIN 5-RELATED | 5 | 374 | - | - | |
| Cone5ag1312 | 405 | MobiDBLite | consensus disorder prediction | 306 | 337 | - | - | |
| Cone5ag1312 | 405 | Gene3D | - | 95 | 137 | - | - | |
| Cone5ag1312 | 405 | SMART | iq_5 | 117 | 138 | IPR000048 | GO:0005515(InterPro) | |
| Cone5ag1312 | 405 | SMART | iq_5 | 94 | 116 | IPR000048 | GO:0005515(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone19ag1272 | Cone-Chr19:8667105 | Cone5ag1312 | Cone-Chr5:7581605 | 4.02E-31 | dispersed | |
| Cone20ag0275 | Cone-Chr20:1221713 | Cone5ag1312 | Cone-Chr5:7581605 | 8.05E-43 | dispersed | |
| Cone2ag0858 | Cone-Chr2:34555900 | Cone5ag1312 | Cone-Chr5:7581605 | 2.75E-10 | dispersed | |
| Cone4ag1669 | Cone-Chr4:12509334 | Cone5ag1312 | Cone-Chr5:7581605 | 1.67E-36 | dispersed | |
| Cone5ag0328 | Cone-Chr5:1384439 | Cone5ag1312 | Cone-Chr5:7581605 | 3.13E-26 | dispersed | |
| Cone5ag1312 | Cone-Chr5:7581605 | Cone5ag1677 | Cone-Chr5:11930675 | 2.79E-33 | dispersed | |
| Cone1ag0388 | Cone-Chr1:3380608 | Cone5ag1312 | Cone-Chr5:7581605 | 2.27E-244 | wgd | |
| Cone11ag1428 | Cone-Chr11:10201611 | Cone5ag1312 | Cone-Chr5:7581605 | 7.19E-131 | wgd | |
| Cone18ag0162 | Cone-Chr18:847631 | Cone5ag1312 | Cone-Chr5:7581605 | 2.86E-131 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone5ag1312 | - | - | - | 0.0 |