Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1350 ATGAACCCTGGAGCACAAATTTCTAATGGACAAGGGGGCTTTGATGAGGCTGCCTCATATGCACCTGCATTTTGTGTCTTGAAACAGTTGATACATAGATGCCTTAAAGATGCTGTTACCTCTGGAAATGTCTATGCAGATGCAATACTGCAGCATCTTTATCGATGGATGTGCAGCCCCCGTTCAAAACTTCATGACCCAGCTCTACATCGAGTACTTCACAAGGTTATGCAAAAGATGTTTGCGTTTTTGTTGTCTGAATTACGGAAATTAGGTGCTACCATCATTTTTGCAAACTTTTCAAGAATTATCATTGACACGGGAAAGTTTGAACTCTCTGCTGCTAAAGCATACTGTGATAGTCTGCTCACAACCTTGCAAACAAGGGATCTTTTTGAATGGATTGAGTTGGAAACACAGCAGTTCTGGCATTCCTTACTGTTTATGGATCAGATGTGA 459 41.18 MNPGAQISNGQGGFDEAASYAPAFCVLKQLIHRCLKDAVTSGNVYADAILQHLYRWMCSPRSKLHDPALHRVLHKVMQKMFAFLLSELRKLGATIIFANFSRIIIDTGKFELSAAKAYCDSLLTTLQTRDLFEWIELETQQFWHSLLFMDQM 152
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8134247 8135138 - Conep05aG0139200.1 Cone5ag1350 438368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1350 152 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 49 152 IPR029703 GO:0000278(PANTHER)|GO:0003677(PANTHER)|GO:0003677(InterPro)|GO:0003887(PANTHER)|GO:0003887(InterPro)|GO:0006260(InterPro)|GO:0006272(PANTHER)|GO:0006281(InterPro)|GO:0006287(PANTHER)|GO:0006297(PANTHER)|GO:0008310(PANTHER)|GO:0008622(PANTHER)|GO:0008622(InterPro)|GO:0045004(PANTHER)
Cone5ag1350 152 SMART DUF1744_2 2 152 IPR013697 GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro)
Cone5ag1350 152 Pfam Domain of unknown function (DUF1744) 9 151 IPR013697 GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0529 Cone-Chr1:5232965 Cone5ag1350 Cone-Chr5:8134247 8.64E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1350 K02324 - csv:101208568 253.832