Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1351 ATGGTGGACTATGTTGGACATGTCAAGGATGCCAAGACAATTGTGCATAGAGCAGTAACTGAGCAAAGACGCGAACATCATGGCCCTACAATAGCTGTCATTGAGTGTCCCAATGCTCAGTTACTGAAGTCGGGTATACGAGCACTAGAAGATTTCCCCTGTGTGAACATCCCTTGCAATGCTCGTGATTGTCAGTATCAGGGCTTAATGGTGTGCTATACAGAGGCTCTTGGATGGCAACAAGTGGCAGCAAAAATTGGAATGCAACTGTGTGCTGCATCATCATCCCAGTGGTTGACTGAGAGAATTTCTCTAGCAAGATATGCCCATGTACCATTGGGAAATTTTGAAATTGACTGGCTTCTATTTACAGCCGATGTCTTCTATTCGAGAGAACTACGGTATCAGCAGCAGGTAATTTGGATATCAGATAATGGTGTTCCTGATCTAGGAGGCATTAGTGAAGAAGATACATGTTTTCTTGATGAGGTTCAACAACCTGTACTGACATACCCTGGAGCATACAGAAAAATTCCTGTGGAGCTTAAGGTTGAGACAATATTGTTCTATGTCTCCGTCTTATTTATTTACCTCTCCACCCTTTCCTTTTTCTTTTCTGACTGCATGCAAATAATTTAG 639 42.41 MVDYVGHVKDAKTIVHRAVTEQRREHHGPTIAVIECPNAQLLKSGIRALEDFPCVNIPCNARDCQYQGLMVCYTEALGWQQVAAKIGMQLCAASSSQWLTERISLARYAHVPLGNFEIDWLLFTADVFYSRELRYQQQVIWISDNGVPDLGGISEEDTCFLDEVQQPVLTYPGAYRKIPVELKVETILFYVSVLFIYLSTLSFFFSDCMQII 212
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 8135253 8137017 - Conep05aG0139300.1 Cone5ag1351 438369
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1351 212 SMART DUF1744_2 1 212 IPR013697 GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro)
Cone5ag1351 212 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 3 179 IPR029703 GO:0000278(PANTHER)|GO:0003677(PANTHER)|GO:0003677(InterPro)|GO:0003887(PANTHER)|GO:0003887(InterPro)|GO:0006260(InterPro)|GO:0006272(PANTHER)|GO:0006281(InterPro)|GO:0006287(PANTHER)|GO:0006297(PANTHER)|GO:0008310(PANTHER)|GO:0008622(PANTHER)|GO:0008622(InterPro)|GO:0045004(PANTHER)
Cone5ag1351 212 Pfam Domain of unknown function (DUF1744) 2 187 IPR013697 GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag1351 Cone-Chr5:8135253 Cone1ag0529 Cone-Chr1:5232965 1.74E-101 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1351 K02324 - vvi:100241432 276.944