Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag1353 | ATGGAGCCGTGGCTGGACGACTTAGCCGACGATCTTCAGAGCCTAAGTTTCACCTCTACAAACACCAACCGTAGCATCAGCTCCTGCTCCGATTCAACTCTAACGGCTTCATTCTCTTCTCAGCTCGGCTCACTCCCCAACAAACCCCACGCGCCGTCGTCAGACCCCTGCTGGTCCGCCATCAAACGGATCAAATGCGAATCCGATTCCTCGACGCGTCAACTCTCACTCTCCGACCTCAAATTCCTTCTCCGGTTGGGCTCCGGCGACATTGGCTCGGTCTACCTCGCGGAGTTGAAGTCCGCCGGAGAAGCAACCAACTCGATCGAGAGATGCGTTTTCGCGGCGAAGGTGATGGATAAGAAGGAGTTAGTTAGTCGGAGCAAAGAAGGACGGGCGAGAACGGAGAAGGAAATACTAGAATTGTTGGATCATCCGTTCTTGCCCACGCTCTACGCGAGTATCGACGCGTCGAAGTGGCTCTGCCTTCTGACGGAATTCTGTCCCGGCGGTGACTTGCACGTTCTCCGGCAACGTCGGCCGCTCAAACGCTTCGATGAAACTGCCGCGAGGTTCTATGCATCCGAGGTAGTTGTCGCCTTGGAGTATCTTCACATGATGGGTATAGTCTACCGTGATCTCAAACCCGAAAATGTTCTAGTTCGATCAGATGGCCACATCATGCTCACTGATTTTGATCTCTCCTTAAGATGCGAAGATTCTACATCAACCCCTCAAGTTATCATTACCAATCAAAACCTGCCAAATCATCACAACTTGGCCCTACAGAACAACAACAATAACTACTCCCTTGATCCCCGTCCCTTTTCATCTTACTCTTCTTGCATTATTCCCAACTGCATTGTCCCTGCTGTCTCATGTTTCCACCCAAAGAGGAAGCATAGGAAGAAGTCGGGTCTACGTAATGGGCCCGAGTTCATTGCGGAGCCCCTTGATGTCCGATCCATGTCATTCGTCGGGACCCATGAATACCTTGCCCCTGAGATCGTATCTGGTGAGGGCCATGGCAGTGCAGTCGACTGGTGGACCCTTGGAGTGTTTGTGTTTGAGATGTTTTATGGTGTGACGCCATTTCGAGGGATGGACAATGAACTAACTTTGGCTAACATTGTTGCTCGAGCCCTCGACTTTCCTAAAGAGCCGGCAGTTCCTGCCACAGCCAAGGACTTGATCTCCCAGTTACTAGTCAAGGATCCCGACCGACGACTGGGATCGGTTATGGGATCATCAACAATCAAGAACCATCCGTTTTTTAAAGGGGTCAATTGGGCATTGTTGAGATGTACAACCCCACCATTTATCCCACCACCATTTTCTAAAGATGATGTATCGCATGAAAGTAGTCCACAAACCCCAATTGAGTATTATTAA | 1392 | 50.36 | MEPWLDDLADDLQSLSFTSTNTNRSISSCSDSTLTASFSSQLGSLPNKPHAPSSDPCWSAIKRIKCESDSSTRQLSLSDLKFLLRLGSGDIGSVYLAELKSAGEATNSIERCVFAAKVMDKKELVSRSKEGRARTEKEILELLDHPFLPTLYASIDASKWLCLLTEFCPGGDLHVLRQRRPLKRFDETAARFYASEVVVALEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLRCEDSTSTPQVIITNQNLPNHHNLALQNNNNNYSLDPRPFSSYSSCIIPNCIVPAVSCFHPKRKHRKKSGLRNGPEFIAEPLDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFEMFYGVTPFRGMDNELTLANIVARALDFPKEPAVPATAKDLISQLLVKDPDRRLGSVMGSSTIKNHPFFKGVNWALLRCTTPPFIPPPFSKDDVSHESSPQTPIEYY | 463 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 8149607 | 8153139 | - | Conep05aG0139500.1 | Cone5ag1353 | 438371 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag1353 | 463 | FunFam | serine/threonine-protein kinase D6PK-like | 172 | 239 | - | - | |
Cone5ag1353 | 463 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 209 | 221 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone5ag1353 | 463 | SMART | serkin_6 | 80 | 425 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone5ag1353 | 463 | PANTHER | FLIPPASE KINASE 1-RELATED | 27 | 446 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cone5ag1353 | 463 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 426 | 463 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone5ag1353 | 463 | FunFam | serine/threonine-protein kinase D6PK-like | 320 | 443 | - | - | |
Cone5ag1353 | 463 | Pfam | Protein kinase domain | 85 | 252 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone5ag1353 | 463 | Pfam | Protein kinase domain | 322 | 425 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone5ag1353 | 463 | SUPERFAMILY | Protein kinase-like (PK-like) | 68 | 454 | IPR011009 | - | |
Cone5ag1353 | 463 | Gene3D | Phosphorylase Kinase; domain 1 | 78 | 171 | - | - | |
Cone5ag1353 | 463 | ProSiteProfiles | Protein kinase domain profile. | 80 | 425 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone5ag1353 | 463 | Gene3D | Transferase(Phosphotransferase) domain 1 | 321 | 443 | - | - | |
Cone5ag1353 | 463 | MobiDBLite | consensus disorder prediction | 444 | 463 | - | - | |
Cone5ag1353 | 463 | Gene3D | Transferase(Phosphotransferase) domain 1 | 172 | 243 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone5ag1353 | Cone-Chr5:8149607 | Cone5ag1793 | Cone-Chr5:12725115 | 7.89E-134 | dispersed | |
Cone1ag0527 | Cone-Chr1:5199629 | Cone5ag1353 | Cone-Chr5:8149607 | 2.51e-318 | wgd | |
Cone10ag0177 | Cone-Chr10:861393 | Cone5ag1353 | Cone-Chr5:8149607 | 2.46E-131 | wgd | |
Cone11ag1361 | Cone-Chr11:9912074 | Cone5ag1353 | Cone-Chr5:8149607 | 4.12E-127 | wgd | |
Cone13ag1200 | Cone-Chr13:9287179 | Cone5ag1353 | Cone-Chr5:8149607 | 5.03E-131 | wgd | |
Cone18ag0217 | Cone-Chr18:1076442 | Cone5ag1353 | Cone-Chr5:8149607 | 4.80E-129 | wgd | |
Cone19ag1184 | Cone-Chr19:8299360 | Cone5ag1353 | Cone-Chr5:8149607 | 6.13E-130 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82879 | PF05664 | UNC_13_homolog | 3.80E-235 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag1353 | K08286 | - | csv:101207262 | 691.034 |