Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1379 ATGAAGAAGTACTACTCATCAGTTCTTGTCCTCTTAATTGTTGTCATTCGGCCACTAGTTTCAGTCTCACAAGATGGTGAGGAGGTGATTAGCCTAAAGGTTCCAAAGCTGAAGAAATTCTCACCTTTTGAGGACTCCCTCTCCTACAGCTTTTATCACCAGAGCTGTCCTGAGGTTGAAGCCATTATTCACAGGAAGCTCATAGAATGGTTTAACAAGGATTACACTCTTGCCGCCAGCTTAATTAGGCTACACTTTCATGACTGCGCTGTTAGGGGATGTGATGCTTCAATTCTTCTGAATCACAAAGGGGGTGAGAGGAGAGCTCCGGTGAGCAAGACCTTGAGAGGGTACGAAGTGATCGATGACATAAAGGCCGAGATAGAGAAAAGATGCCCAAAAACAGTGTCATGTGCAGATATCTTGACAGCAGTTGCAAGAGACGCCATTGTTCTTGTCGGTGGTCCTTATTGGATGATCCCTTATGGAAGAAGAGATGGAAAGATTTCCATTGCCAAGGAAACCCTAAAAGTTCCAATGGGTCATGAAAATATCACTTCCCTCATTGTGCATTTCCAGTCATGGGGTTTGAATGTTCTTGACTTGGTTGTTCTTTCAGGCGCACATACTATTGGAAGGTGTAATTGCGGGGTGATTCAAAAAAGGCTGTTTAACTATTCCGGATCTGGGAAACCCGACCCGTCACTTGATCCCAAATACCTTATCTTCTTGAAGAAGAAATGCAGATGGGCCTCAGATTTTGTGGATTTCGATCCTACGACCCCAAATAAGTTTGACAATGAGTACTTTGATAATTTACCGAAGAAGATGGGCTTCTTGTCCACTGATTCGTTGCTTTATATTGATTCAAGGACCGCACCTATCGCCAAAGCCCTGTCTCACCAACCCCGTGTCTTCTACCACCAGTTTGGGGTTTCCATGGCTAAACTTGGGAATGTTCAAGTTCTCACGGGCCCTTACGAAGGAGAAATTCGAACCCAGTGCAGTTTTGTCAATGGCCGAAGACGTTAA 1032 44.48 MKKYYSSVLVLLIVVIRPLVSVSQDGEEVISLKVPKLKKFSPFEDSLSYSFYHQSCPEVEAIIHRKLIEWFNKDYTLAASLIRLHFHDCAVRGCDASILLNHKGGERRAPVSKTLRGYEVIDDIKAEIEKRCPKTVSCADILTAVARDAIVLVGGPYWMIPYGRRDGKISIAKETLKVPMGHENITSLIVHFQSWGLNVLDLVVLSGAHTIGRCNCGVIQKRLFNYSGSGKPDPSLDPKYLIFLKKKCRWASDFVDFDPTTPNKFDNEYFDNLPKKMGFLSTDSLLYIDSRTAPIAKALSHQPRVFYHQFGVSMAKLGNVQVLTGPYEGEIRTQCSFVNGRRR 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8424671 8425933 - Conep05aG0142300.1 Cone5ag1379 438397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1379 343 Gene3D - 50 339 - -
Cone5ag1379 343 PRINTS Plant peroxidase signature 272 289 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 PRINTS Plant peroxidase signature 256 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 PRINTS Plant peroxidase signature 80 100 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 PRINTS Plant peroxidase signature 56 75 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 Pfam Peroxidase 65 299 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Cone5ag1379 343 ProSiteProfiles Plant heme peroxidase family profile. 46 339 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 FunFam Peroxidase 50 191 - -
Cone5ag1379 343 SUPERFAMILY Heme-dependent peroxidases 47 339 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 FunFam Peroxidase 179 317 - -
Cone5ag1379 343 CDD secretory_peroxidase 47 338 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone5ag1379 343 Gene3D Peroxidase, domain 2 179 317 - -
Cone5ag1379 343 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 PRINTS Haem peroxidase superfamily signature 258 273 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 PRINTS Haem peroxidase superfamily signature 78 92 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1379 343 PANTHER PEROXIDASE 25-RELATED 34 335 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone5ag1379 343 ProSitePatterns Peroxidases active site signature. 78 89 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag1517 Cone-Chr3:33696351 Cone5ag1379 Cone-Chr5:8424671 1.38E-128 dispersed
Cone5ag1379 Cone-Chr5:8424671 Cone8ag1448 Cone-Chr8:11200470 2.83E-82 dispersed
Cone1ag0365 Cone-Chr1:3039286 Cone5ag1379 Cone-Chr5:8424671 6.47E-240 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1379 K00430 - csv:101208042 481.1