Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1429 ATGGCATCAACATCAAGTTCCATGATCTTCTTCTACTTTCTTGTGATTTCTGTGTCATTTTCAGGATCTGTTCAAGCTTACAAGAACTACACAGTCGGGGACTCATTGGGTTGGTATGACAATCTCTTGAAGCCTACTCTTAATTACCAAAAATGGGTTTCTGACAAGAATTTCAGCTTGGGAGATTTTCTCATTTTCAATACAGATAACAACCACTCAGTCGTCCAAACCTACAATTTCACCACCTACAAGCTTTGTGATTACGACAATGCTCAAGAAAACGATACAATTCAATGGTCGTCAGCCGATCCATCAGCAACTGCGCCGGAAACGACCACAGTAGCAGTTCCTCTCGTTAAAGAAGGCATGAACTATTTCTTTTCAGGCAATTATGATGGGGAGCAATGCAAGCATGGCCAACACTTTAAGGTAAATGTGACGCATGGCCAAGGCTTACCCCCAAGTTTGAAGAGCCCATCGGAAGATTCTCCAGCTCCAGCGAATCCCGATTCCGGTGATGATGAATCTGCGCCAGACACTCTTGTACCTTCCAATTACAATAACCCTCGAGAAGAGGAAGCTGATAACGAGGAATCTGGGTCTGTTTCATTATCAAAGTACTTAAAGCTTACAGATGTAACAATGAATTTGTTTATCATGTTATTCATTGGGTTTGTTTGCGTGATTTGA 690 41.88 MASTSSSMIFFYFLVISVSFSGSVQAYKNYTVGDSLGWYDNLLKPTLNYQKWVSDKNFSLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDNAQENDTIQWSSADPSATAPETTTVAVPLVKEGMNYFFSGNYDGEQCKHGQHFKVNVTHGQGLPPSLKSPSEDSPAPANPDSGDDESAPDTLVPSNYNNPREEEADNEESGSVSLSKYLKLTDVTMNLFIMLFIGFVCVI 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9098513 9100691 + Conep05aG0147400.1 Cone5ag1429 438447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1429 229 FunFam Early nodulin-like protein 18 27 149 - -
Cone5ag1429 229 ProSiteProfiles Phytocyanin domain profile. 28 148 IPR003245 GO:0009055(InterPro)
Cone5ag1429 229 Pfam Plastocyanin-like domain 47 140 IPR003245 GO:0009055(InterPro)
Cone5ag1429 229 Gene3D - 26 149 IPR008972 -
Cone5ag1429 229 MobiDBLite consensus disorder prediction 147 202 - -
Cone5ag1429 229 MobiDBLite consensus disorder prediction 151 165 - -
Cone5ag1429 229 SUPERFAMILY Cupredoxins 28 147 IPR008972 -
Cone5ag1429 229 CDD Phytocyanin 28 146 - -
Cone5ag1429 229 PANTHER BLUE COPPER PROTEIN 15 161 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0375 Cone-Chr11:1839974 Cone5ag1429 Cone-Chr5:9098513 6.74E-39 dispersed
Cone5ag1429 Cone-Chr5:9098513 Cone7ag0625 Cone-Chr7:3123599 5.87E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1429 - - - 0.0