Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag1429 | ATGGCATCAACATCAAGTTCCATGATCTTCTTCTACTTTCTTGTGATTTCTGTGTCATTTTCAGGATCTGTTCAAGCTTACAAGAACTACACAGTCGGGGACTCATTGGGTTGGTATGACAATCTCTTGAAGCCTACTCTTAATTACCAAAAATGGGTTTCTGACAAGAATTTCAGCTTGGGAGATTTTCTCATTTTCAATACAGATAACAACCACTCAGTCGTCCAAACCTACAATTTCACCACCTACAAGCTTTGTGATTACGACAATGCTCAAGAAAACGATACAATTCAATGGTCGTCAGCCGATCCATCAGCAACTGCGCCGGAAACGACCACAGTAGCAGTTCCTCTCGTTAAAGAAGGCATGAACTATTTCTTTTCAGGCAATTATGATGGGGAGCAATGCAAGCATGGCCAACACTTTAAGGTAAATGTGACGCATGGCCAAGGCTTACCCCCAAGTTTGAAGAGCCCATCGGAAGATTCTCCAGCTCCAGCGAATCCCGATTCCGGTGATGATGAATCTGCGCCAGACACTCTTGTACCTTCCAATTACAATAACCCTCGAGAAGAGGAAGCTGATAACGAGGAATCTGGGTCTGTTTCATTATCAAAGTACTTAAAGCTTACAGATGTAACAATGAATTTGTTTATCATGTTATTCATTGGGTTTGTTTGCGTGATTTGA | 690 | 41.88 | MASTSSSMIFFYFLVISVSFSGSVQAYKNYTVGDSLGWYDNLLKPTLNYQKWVSDKNFSLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDNAQENDTIQWSSADPSATAPETTTVAVPLVKEGMNYFFSGNYDGEQCKHGQHFKVNVTHGQGLPPSLKSPSEDSPAPANPDSGDDESAPDTLVPSNYNNPREEEADNEESGSVSLSKYLKLTDVTMNLFIMLFIGFVCVI | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 9098513 | 9100691 | + | Conep05aG0147400.1 | Cone5ag1429 | 438447 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag1429 | 229 | FunFam | Early nodulin-like protein 18 | 27 | 149 | - | - | |
Cone5ag1429 | 229 | ProSiteProfiles | Phytocyanin domain profile. | 28 | 148 | IPR003245 | GO:0009055(InterPro) | |
Cone5ag1429 | 229 | Pfam | Plastocyanin-like domain | 47 | 140 | IPR003245 | GO:0009055(InterPro) | |
Cone5ag1429 | 229 | Gene3D | - | 26 | 149 | IPR008972 | - | |
Cone5ag1429 | 229 | MobiDBLite | consensus disorder prediction | 147 | 202 | - | - | |
Cone5ag1429 | 229 | MobiDBLite | consensus disorder prediction | 151 | 165 | - | - | |
Cone5ag1429 | 229 | SUPERFAMILY | Cupredoxins | 28 | 147 | IPR008972 | - | |
Cone5ag1429 | 229 | CDD | Phytocyanin | 28 | 146 | - | - | |
Cone5ag1429 | 229 | PANTHER | BLUE COPPER PROTEIN | 15 | 161 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0375 | Cone-Chr11:1839974 | Cone5ag1429 | Cone-Chr5:9098513 | 6.74E-39 | dispersed | |
Cone5ag1429 | Cone-Chr5:9098513 | Cone7ag0625 | Cone-Chr7:3123599 | 5.87E-07 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag1429 | - | - | - | 0.0 |