Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1431 ATGACTTCTTCAGTCATCGCTAATGACGCTGCAGAGCCTGTCGATGTTCTTAAGAATTTATCCCTTGAGGATCAAGATCAGGTGAAGATGCAAAGTAAGGTAGAGGTGCAAGAAATGGAGAGCGGAGATCATGGGCAGGTCTGTGCAATATGCTTGAATAAGATAGTTCTTCAAGAAACTGCGCTTGTGAAAGGTTGCGAGCATGCTTACTGTGTGGTGTGCATTCTTCGTTGGGCCTCGTATAGACAAAACCCGACATGCCCTCAATGTAAACACCCATTTGAGTTCCTCAACGTCCACCGCATGCTTGATGGCAGCATAAGGGATTACATGTTCGAGGAGAGTGTATGCCTCCTCCTTAGAGCCTCGTGGTTTGAACCTTTAGTTGTTGACGATCATGGACTTCCTTTTCACGATGTAGAGGAACCTATTTTCGAGGACACTGAAGACTACTATCTCTACGAGGATGATGATGATGAACTGGAGGAAGCTTATTTTGGAAGGTCATCGACTCTTAGAATAGGTAATAGAAGGTGGGGCGATAATGGTTATGTAAGTGCAGGTCGGCAAGAAGCAAGGCCAGTGCCTAGGCGAAACACTAGCCCGAATTCAGATGCAGGTTCTTCTTCTAGAGAACCAAAGAAAAAAGAAGTCGCAAAGGATAAAACAGGACGGAGGGCTAAGCGGGCCCTCAAACGAGAGGCTGCTGATAAGGCAGCTGCAGCAAAACATCGGGAGCATCTGGCAAGGTTTGGGAGGAACTGA 765 46.8 MTSSVIANDAAEPVDVLKNLSLEDQDQVKMQSKVEVQEMESGDHGQVCAICLNKIVLQETALVKGCEHAYCVVCILRWASYRQNPTCPQCKHPFEFLNVHRMLDGSIRDYMFEESVCLLLRASWFEPLVVDDHGLPFHDVEEPIFEDTEDYYLYEDDDDELEEAYFGRSSTLRIGNRRWGDNGYVSAGRQEARPVPRRNTSPNSDAGSSSREPKKKEVAKDKTGRRAKRALKREAADKAAAAKHREHLARFGRN 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9152368 9154829 + Conep05aG0147700.1 Cone5ag1431 438449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1431 254 ProSitePatterns Zinc finger RING-type signature. 66 75 IPR017907 -
Cone5ag1431 254 SUPERFAMILY RING/U-box 29 97 - -
Cone5ag1431 254 MobiDBLite consensus disorder prediction 209 254 - -
Cone5ag1431 254 SMART ring_2 48 90 IPR001841 -
Cone5ag1431 254 CDD RING-HC_Topors 45 94 - -
Cone5ag1431 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 113 IPR013083 -
Cone5ag1431 254 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 4 253 - -
Cone5ag1431 254 MobiDBLite consensus disorder prediction 187 254 - -
Cone5ag1431 254 Pfam Ring finger domain 47 91 IPR001841 -
Cone5ag1431 254 ProSiteProfiles Zinc finger RING-type profile. 48 91 IPR001841 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1431 - - - 0.0