Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1440 ATGGATAATTTAGACAGAGAAATAGAGTACGTGAGAGAGTACTATAGAAGTGGGAAAACTAAAGAAGCTTCTTGGAGAAGATCCCAACTCCTAAGCTTGCTTAAGCTTGTAAAAGAAAAAGAGGGAGATATCTTTAAGGCCATCATGCAAGACTTGGGAAAACATTACATTGAGGCCTATAGAGATGAGGTAGGAATAGTGATCAAATCCTTAAATTATGCATTAAACAATTTGAAAGAATGGATGTCAGGCAGAAAGGCTAAACTTCCTGCAATTGCGTTGCTTAGTACAGCCGAAATCATCCCCGAGCCGCTCGGCCTAATCCTTGTCCTCTCATGTTGGAACTTTCCCATTGGACTGTCTTTGGAACCACTGATAGGAGCCTTAGCTGCTGGAAACTGTGTCGTTTTGAAACCTTCAGAGTTGGCTCCTGCTTGTTCAAATCTTCTAGCTACTACAATCCCACATTATCTAGACAATAAAGCTGTCAAGGTTTATCAAGGTGGCCCTTCTGTTGGGGAACATCTTCTTTGCCAAAGATGGGACAAAATATTATTTACTGGAAGCCCACGAATTGGACGGCTAGTCCTGTCAGCTGCCGCAAAGCATCTAACCCCGGTTAGTCTCGAGTTAGGCGGGAAATGCCCGGCAGTTGTTGATTCCCTTTCAAATTCTTGGGAACTAGAGGCCGCTGCTAAACGAATTATAGTAGCAAAATACGGAGCATGTTCGGGTCAAGTGGAAACAATGAAGGATGTGATCGAGAAGATGTTCGGACAAAATCCTAAAGAATCGAACAGTATAGCAAGAATAATAAACAAACAACATTTCATGAGATTGAAGGGTCTTGTAGATGATCCAACGGTCCAAAATGCTGTCGTTTATGGAGGTTCAATGCAGGAAGATGAACTGTTTATTGAGCCTACAATATTGGTTGATCCTCCACTTGATGCTGAAATAATGACAGAAGAAATATTTGGCCCATTTCTTCCAATAATTGGGTTGGACAAGATTGAAGACAGTATAGAATTCATGAAGACAAGGCCCAAACCTCTTGTTATATATGCCTTCACAAAGAATAAAGCTTTTCAGCAAAGAATGATATCAGGGACGTCATCTGGAAGCTTGGTTTTCAATGACACACTTGTTCAATATGCAGCTGATACACTGCCGTTCGGAGGGATTGGAGAAAGCGGGACCGGCAGGTATCACGGAAAGTTCTCTTTCGATACATTTAGTCATGAGAAGGTGATTGCAAGAAGGAGCTTCCTAACCGACTTTTGGTTCCGATATCCGCCGTGGAGCAACTACAAGTTGCAACTTCTAGAAGCTGCTTACAATTTCAATTACCTTCAAATGGCCCTCATTACTCTAGGCTTGAAGAGCTCTTAA 1392 41.95 MDNLDREIEYVREYYRSGKTKEASWRRSQLLSLLKLVKEKEGDIFKAIMQDLGKHYIEAYRDEVGIVIKSLNYALNNLKEWMSGRKAKLPAIALLSTAEIIPEPLGLILVLSCWNFPIGLSLEPLIGALAAGNCVVLKPSELAPACSNLLATTIPHYLDNKAVKVYQGGPSVGEHLLCQRWDKILFTGSPRIGRLVLSAAAKHLTPVSLELGGKCPAVVDSLSNSWELEAAAKRIIVAKYGACSGQVETMKDVIEKMFGQNPKESNSIARIINKQHFMRLKGLVDDPTVQNAVVYGGSMQEDELFIEPTILVDPPLDAEIMTEEIFGPFLPIIGLDKIEDSIEFMKTRPKPLVIYAFTKNKAFQQRMISGTSSGSLVFNDTLVQYAADTLPFGGIGESGTGRYHGKFSFDTFSHEKVIARRSFLTDFWFRYPPWSNYKLQLLEAAYNFNYLQMALITLGLKSS 463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9257318 9261788 - Conep05aG0148600.1 Cone5ag1440 438458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1440 463 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 247 398 IPR016163 GO:0016620(InterPro)
Cone5ag1440 463 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 245 IPR016163 GO:0016620(InterPro)
Cone5ag1440 463 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 399 416 IPR016162 GO:0016491(InterPro)
Cone5ag1440 463 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 212 IPR016162 GO:0016491(InterPro)
Cone5ag1440 463 SUPERFAMILY ALDH-like 5 435 IPR016161 GO:0016491(InterPro)
Cone5ag1440 463 Pfam Aldehyde dehydrogenase family 8 417 IPR015590 GO:0016491(InterPro)
Cone5ag1440 463 FunFam Aldehyde dehydrogenase 12 216 - -
Cone5ag1440 463 PANTHER ALDEHYDE DEHYDROGENASE 3 458 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Cone5ag1440 463 PIRSF ALDH 246 458 IPR012394 GO:0006081(InterPro)
Cone5ag1440 463 PIRSF ALDH 2 247 IPR012394 GO:0006081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag1440 Cone-Chr5:9257318 Cone7ag1521 Cone-Chr7:10561375 3.44E-148 dispersed
Cone6ag1661 Cone-Chr6:12657126 Cone5ag1440 Cone-Chr5:9257318 5.91E-193 transposed
Cone1ag0445 Cone-Chr1:4025165 Cone5ag1440 Cone-Chr5:9257318 6.38E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1440 K00128 - cit:102624275 652.899