Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1488 ATGGCGAGAATCTCACTTTGTATCAAGACAATCTCCATCTCCTTCCTCCTCATTGCCATATTCACACCCAGATTAGTTCTATCCGCCCAAAACAGTACATCATGTGCAACAGAAACCAATTCATGCACAAACAAGAAGAAATCTTTGCCTCTCAAGATCATAGCCATTTTCTCTATCCTTATAACAAGTGTGATCGGAGTATCCTTACCTCTAGTTTCTCGTTCGATCAAAGCTCTCCAACCCGATAGAAACCTTTTCGTGATCCTCAAGTGCTTTGCGGCCGGTATCATACTGGCAACAGGGTTCATGCATGTTTTACCTGATTCTTTCGACATGCTTTGGGTTAATGATTGTTTGAGTGACAAACCATGGCATGATTTCCCGTTTACCGGATTCGTAGCTATGTTGTCTGCTCTATTTACTTTAATGGTGGATTCTATGGCTACTAGCATATATGGCAACAAACGTAATAACGTTATTCCTGAAAAAGAAGGTATTGGTCAAGGAGACGAAGAGATGCCTGCTCATGTTGTAAGTACTGGTCATGGATATCTTCATGGTCACCATCATCATCATCATAATCAAGCTGTCAAGGAATTTGAAACTGCTGATTCCGAATTGATACGTTACCGTGTTGTTGCTATGGTATTAGAACTAGGGATTGTTGTTCATTCAGTAGTGATTGGGCTTTCTCTCGGAGCTTCAAATAACACTTGCTCCATTAAGGGCCTTGTGGCTGCTCTTTGCTTCCATCAAATGTTTGAAGGAATGGGTCTTGGTGGCTGCATTCTTCAGGCTGAATACAATTTGGTGAAGAAGCTTATGATGGTATTTTTCTTCTCAGTTACCACCCCATTTGGGATTGCCCTAGGGATAGGGTCATCTAACGTTTACGAAGAAAATAGTCCAAGCTCATTGATCACAGTTGGACTACTAAATGCATCGTCAGCTGGGCTTTTGATCTACATGGCTTTAGTCGATCTCCTTTCTGCAGAATTCATGGGACGAAAGTTGCAGGGCAGCATCAAGCTCCAGATTAAATCTTATGTTGCTGTACTTCTGGGTGCTGGTGCGATGTCTCTTATGGCTAAATGGGCTTGA 1101 42.14 MARISLCIKTISISFLLIAIFTPRLVLSAQNSTSCATETNSCTNKKKSLPLKIIAIFSILITSVIGVSLPLVSRSIKALQPDRNLFVILKCFAAGIILATGFMHVLPDSFDMLWVNDCLSDKPWHDFPFTGFVAMLSALFTLMVDSMATSIYGNKRNNVIPEKEGIGQGDEEMPAHVVSTGHGYLHGHHHHHHNQAVKEFETADSELIRYRVVAMVLELGIVVHSVVIGLSLGASNNTCSIKGLVAALCFHQMFEGMGLGGCILQAEYNLVKKLMMVFFFSVTTPFGIALGIGSSNVYEENSPSSLITVGLLNASSAGLLIYMALVDLLSAEFMGRKLQGSIKLQIKSYVAVLLGAGAMSLMAKWA 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9992994 9995996 + Conep05aG0153500.1 Cone5ag1488 438506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1488 366 PANTHER ZINC/IRON TRANSPORTER 46 365 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cone5ag1488 366 Pfam ZIP Zinc transporter 50 363 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cone5ag1488 366 NCBIfam ZIP zinc/iron transport family 37 366 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0061 Cone-Chr4:309888 Cone5ag1488 Cone-Chr5:9992994 6.78E-72 dispersed
Cone5ag1488 Cone-Chr5:9992994 Cone9ag0269 Cone-Chr9:1146817 2.58E-102 dispersed
Cone1ag0346 Cone-Chr1:2820188 Cone5ag1488 Cone-Chr5:9992994 4.97E-233 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1488 K14709 - csv:101221552 481.87