Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1492 ATGGATTCTACTGCTGAAATTGATGAAGATCCTGAAAATAAAGGTAGTATGTGGGTTTTGGATCAGAGTATTGATCAGCCCATGGATGAGGAGGCTGGAAGGCTAAAGCACATGTACAGGGAGAAGAAATTTTCTGGGTTGTTGCTTCTGCGGCTTGCATTTCAAAGCCTTGGAGTGGTTTATGGAGATTTGGGCACTTCTCCTTTATATGTTTTCCACAATACATTTCCGCATGGAATCTCTGATCCAGAAGATATTATTGGAACTCTTTCATTGATCATATACTCGCTCACTCTTATTCCCCTTCTCAAGTATGTATTCATCGTGTGTCGAGCAAATGACAATGGCCAAGGAGGGACATTTGCTCTTTATTCCTTGCTATGTAGACATGCTAAGGTAAAAACTATTCCTAACCAACACAGGACGGATGAGGAACTAACAACATATATTCGCTCAACTTTTAATGAAAAATCATTTGCTGCAAAAACTAAGAGATGGCTTGAGGGACATGGATCTAGGAAGAATGCACTGCTTATACTTGTCCTTGTTGGAACTTGCATGGTTATTGGAGATGGTATTCTCACTCCTGCAATGTCCGTGTTATCAGCAACTGGCGGAATCAAGGTAAACCACCCTAGTTTGAGCAATGATGTAGTAGTGGTTGTAGCAGTTGTAATATTAGTCGGTTTATTTAGTATGCAACACTACGGTACAGATAAAGTCGGCTGGCTCTTTGCTCCAATCATTCTACTTTGGTTCCTTTTGATTGGAGGTATTGGAATTTTCAATATATGGAAGTATGATAGTAGTGTGCTAAGAGCATTTTCACCTGTGTATATATACCAATACTTCAAAAGGGGAAGAAAAAATGGTTGGACCTCACTTGGAGGTATCATGCTCAGTATCACAGGGACAGAGGCCCTTTTCGCTGATCTAGCCCATTTTCCAGTTTTGGCTGTACAGATTGCCTTTACTTTACTTGTGTTTCCTTGCCTTCTTTTGGCCTATTCAGGACAAGCTGCATATCTTATGAAGAATAAGGACCATGTGGTTGATGTCTTTTATCGTTCTATACCAGATAGCATATACTGGCCGGTATTCATTGTTGCAACAGCAGCTGCAATAGTTGCAAGTCAAGCCACTATATCAGCAACTTTTTCAATAATTAAACAGGCCCTAGCACTGGGTTGTTTTCCAAGAGTCAAAGTTGTTCATACTTCGAAGAAGTTCCTCGGACAAATATATATTCCGGATATTAACTGGATCCTCATGATTCTTTGTATTGCCGTCACTGCTGGATTTAAAAACCAAAGTCAGATCGGAAACGCTTACGGGACTGCAGTGGTGATAGTCATGCTTGTAACCACATTTCTCATGATTCTAATCATGGTACTAGTATGGAGATGCCATTGGATGCTTGTACTCATTTTCACCGGCTCATCACTAGTCATAGAAGGCACTTACTTTTCCTCCGTGCTCTGCAAGGTTGATCAAGGTGGATGGGTCCCACTCGTGATTGCTGCTGCCTTTTTATTCATCATGTATGTTTGGCATTACTGTTCCGTAAAACGCTACGAATTTGAGATGCATAGTAAGGTCTCTATGGCATGGATCCTCGGGCTGGGCCCCAGTCTAGGACTTGTGCGGGTCCCAGGAATTGGACTCGTTTATACTGAGCTAGCAAGTGGGGTCCCACATATCTTTTCCCATTTAATTACAAACTTACCTGCAATCCATTCGGTTGTTGTCTTTGTCTGTGTGAAATACCTTCCCGTCTATACTGTCCCAGAGGAAGAGAGATTCCTTGTAAAGCGAATCGGGCCGAAGAATTTTCACATTTTCCGTTGTGTAGCAAGATATGGCTATAAAGACCTTCATAAGAAGGATGATGACTTTGAGAAAAAACTCTTTGATAGCCTTTTTCTACTTGTTCGGCTTGAATCTATGATGGAAGGGTGTTCTGATTCAGATGAGTACAGTCTTTATAACCAGCAAACTGCTGAGTCAAGGGAGGGCTTATTGAGTAACAATGGCAATACTGTAATTTCATCAATGGATTCAATAACACCTGCAAAATCGACATTGGGTTCGGGTTTCTTGGTCAGTTCTTCCGGGCAGGTGAGCAGCCTCACCGAGAGTACGGAGCTTGAGTTTTTGAATAGTTGCAGAGATGCTGGAGTAGTACACATAATGGGGAACACAGTGGTGAAATCAAGGAGAGATTCATGGTTGTGCAAGAAGATAGCTGTGGATTATATTTATGCTTTTCTTCGGAAGATATGCCGGGATAATAGTGTGATCTTTAATATTCCTCATGAGAGTCTACTGAATGTGGGGCAAGTTTTCTATGTATAG 2355 41.44 MDSTAEIDEDPENKGSMWVLDQSIDQPMDEEAGRLKHMYREKKFSGLLLLRLAFQSLGVVYGDLGTSPLYVFHNTFPHGISDPEDIIGTLSLIIYSLTLIPLLKYVFIVCRANDNGQGGTFALYSLLCRHAKVKTIPNQHRTDEELTTYIRSTFNEKSFAAKTKRWLEGHGSRKNALLILVLVGTCMVIGDGILTPAMSVLSATGGIKVNHPSLSNDVVVVVAVVILVGLFSMQHYGTDKVGWLFAPIILLWFLLIGGIGIFNIWKYDSSVLRAFSPVYIYQYFKRGRKNGWTSLGGIMLSITGTEALFADLAHFPVLAVQIAFTLLVFPCLLLAYSGQAAYLMKNKDHVVDVFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTFLMILIMVLVWRCHWMLVLIFTGSSLVIEGTYFSSVLCKVDQGGWVPLVIAAAFLFIMYVWHYCSVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHLITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHIFRCVARYGYKDLHKKDDDFEKKLFDSLFLLVRLESMMEGCSDSDEYSLYNQQTAESREGLLSNNGNTVISSMDSITPAKSTLGSGFLVSSSGQVSSLTESTELEFLNSCRDAGVVHIMGNTVVKSRRDSWLCKKIAVDYIYAFLRKICRDNSVIFNIPHESLLNVGQVFYV 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10053485 10059185 + Conep05aG0153900.1 Cone5ag1492 438510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1492 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 46 783 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cone5ag1492 784 Pfam K+ potassium transporter integral membrane domain 52 538 IPR053951 -
Cone5ag1492 784 NCBIfam potassium uptake protein 52 784 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone5ag1492 784 Pfam K+ potassium transporter C-terminal domain 551 781 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0500 Cone-Chr17:2478399 Cone5ag1492 Cone-Chr5:10053485 2.83E-48 dispersed
Cone3ag1098 Cone-Chr3:29592828 Cone5ag1492 Cone-Chr5:10053485 5.86E-227 dispersed
Cone5ag1492 Cone-Chr5:10053485 Cone6ag1107 Cone-Chr6:6921913 0 dispersed
Cone5ag1492 Cone-Chr5:10053485 Cone9ag1102 Cone-Chr9:7060104 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1492 K03549 - vvi:100264706 1311.21