Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1495 ATGGAAGCTAGTAAAAAAGAGGAAGTTGTAGATGTACGGTCAGTGGTGGAAGCTGTGGCTTCGAATGACCGGGTTGATTCTCCCATTTATGAGGTCGAAAGCCTTTGCATGCGCTGTGGCCAAAATGGAATAACAAGGTTTCTATTGACTTTCATTCCACACTTTAGGAAGATTTTGCTGTCAGCCTTTGAATGTCCACACTGCAGCGAGAGGAACAATGAAGTTCAGTTTGCTGGCGAGATTCAACCCCGTGGTTGTTGCTACAGTTTAGAGGTCCCTGTAGGAGATCAGAAGGTACTTAATCGACAAGTGGTGAAATCTGAGTCTGCCACCATCAAGATCCCTCATTTGGAATTCGAGATTCCCCCAGAAGCTCAGCGTGGAACACTATCAACTGTGGAAGGGATATTGGTACGAGCTGTGGAGGGGCTGGAAGCCCTTCAGGAGGAACGTCGGAAAGTGGATCCTCAGACTGCTGAAGCAATAGACCAATTCTTGTTAAAATTGAGATCTTGTGCAAAAGGAGATTCATCTTTCACCTTCATCTTGGATGATCCATCAGGAAACAGCTTCATTGAGAATCCATTTACTCCATCCTTGGACCAGTCATTGAGTATTAAGTTCTACGAGCGAACTCCAGAGCAGCAAGCATCATTGGGGTATTCAATTGACTCGTCTCAGTTAGTTCACGCTGGTGATAGAACATCAATAGAGGAAGGCCCTGGTCCTTCTTCTGATCAAGTTAGAGATCTGAATGGATCAATTGGAGCAGTAGCTGGTCATAGAGCCATTGCTCAGAGTAACAGTACAGAAATTGCTGAAGCTTTGTTTCGTTACACTGCACCTGAAGAAGTGATGACATTCCCATCAACATGTGGATCATGTGTTACCGCGTGTGAGACTCGAATGTTTGTCACCAATATTCCTTACTTCCAAGAAGTTATTGTGATGGCATCTACATGTGATTCCTGTGGGTACCGCAATTCAGAGTTGAAGCCTGGTGGGCGAATTCCTGATAAAGGGAAGAGAATTACCCTCTATGTCAAGAATGTTAGGGATCTTGTCCGGGATGTGATTAAGTCAGATACTGCAAGTGTGAGAGTCCCTGAGCTCGAACTGGAGCTGGCTAGTGGCACTCTTGGGGGAGCTGTTACAACAATTGAAGGTTTAATTACAAAAATTAGTGAAAGCCTTGAGAGAATTCACGGATTTACTTTTGGGGACAGTCTTGATGAAAATAAAAGAAGCAAGTGGCTAGACTTCAAAGCAAGATTAAATAAGCTGTTAAGCTTAGCAGAGCCTTGGACATTAATTCTTGACGATGCCTTGGCAAATTCATTTGTTGCACCAGCAACTGATGACATCAAAGATGATCTACAGTTGACATTTGAAGAGTATAAGAGATCGTGGGAGCAAAATGAAGAATTGGGTCTGAATGATATTGACACTACTTCTGCTGATGCAGCTTATAATGATCCAACCGACGCAACAAAACAAGTTTGA 1503 43.51 MEASKKEEVVDVRSVVEAVASNDRVDSPIYEVESLCMRCGQNGITRFLLTFIPHFRKILLSAFECPHCSERNNEVQFAGEIQPRGCCYSLEVPVGDQKVLNRQVVKSESATIKIPHLEFEIPPEAQRGTLSTVEGILVRAVEGLEALQEERRKVDPQTAEAIDQFLLKLRSCAKGDSSFTFILDDPSGNSFIENPFTPSLDQSLSIKFYERTPEQQASLGYSIDSSQLVHAGDRTSIEEGPGPSSDQVRDLNGSIGAVAGHRAIAQSNSTEIAEALFRYTAPEEVMTFPSTCGSCVTACETRMFVTNIPYFQEVIVMASTCDSCGYRNSELKPGGRIPDKGKRITLYVKNVRDLVRDVIKSDTASVRVPELELELASGTLGGAVTTIEGLITKISESLERIHGFTFGDSLDENKRSKWLDFKARLNKLLSLAEPWTLILDDALANSFVAPATDDIKDDLQLTFEEYKRSWEQNEELGLNDIDTTSADAAYNDPTDATKQV 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10094002 10101871 + Conep05aG0154200.1 Cone5ag1495 438513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1495 500 NCBIfam ZPR1 zinc finger domain 36 220 IPR004457 GO:0008270(InterPro)
Cone5ag1495 500 NCBIfam ZPR1 zinc finger domain 291 482 IPR004457 GO:0008270(InterPro)
Cone5ag1495 500 Gene3D ZPR1, zinc finger domain 24 79 IPR042452 -
Cone5ag1495 500 Gene3D ZPR1, zinc finger domain 280 335 IPR042452 -
Cone5ag1495 500 Pfam ZPR1 jelly-roll domain 100 221 - -
Cone5ag1495 500 Pfam ZPR1 jelly-roll domain 353 478 - -
Cone5ag1495 500 Pfam ZPR1 zinc-finger domain 284 338 IPR004457 GO:0008270(InterPro)
Cone5ag1495 500 Pfam ZPR1 zinc-finger domain 31 83 IPR004457 GO:0008270(InterPro)
Cone5ag1495 500 MobiDBLite consensus disorder prediction 480 500 - -
Cone5ag1495 500 FunFam Zinc finger protein ZPR1 281 335 - -
Cone5ag1495 500 FunFam zinc finger protein ZPR1 80 221 - -
Cone5ag1495 500 FunFam Zinc finger protein ZPR1 336 478 - -
Cone5ag1495 500 PANTHER ZINC FINGER PROTEIN ZPR1 5 489 IPR040141 GO:0005634(PANTHER)|GO:0005737(PANTHER)
Cone5ag1495 500 SMART zpr1 34 194 IPR004457 GO:0008270(InterPro)
Cone5ag1495 500 SMART zpr1 290 450 IPR004457 GO:0008270(InterPro)
Cone5ag1495 500 Gene3D ZPR1, A/B domain 80 221 IPR042451 -
Cone5ag1495 500 Gene3D ZPR1, A/B domain 336 478 IPR042451 -
Cone5ag1495 500 FunFam Zinc finger protein ZPR1 24 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0336 Cone-Chr1:2635638 Cone5ag1495 Cone-Chr5:10094002 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1495 K06874 - rcu:8258732 794.653