Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag1503 | ATGGCTAATCCTCTCAAAAAGCCAGTAGCGTTAGGCTGCCTTCTTTTATTTTCTCTCTTTGCTTCTTCTTCCGTTGCTCTTTCTGATTCAGAAGCCTCTCTAATCGCTCATCGCCAGTTAACTGCACTTAGAGAATTTGATCTACTTCCTGATAAATTTGAGTTCCAAGTCGATCTTGGAGCTCTAGCTACAGCTTTTACAAATGATAGGCTTAAGGGAGCCTACATTGCTCTTCAAGCATTGAAAAATGCCATATATTCTGACCCATTTAACAACACTGCCAATTGGGTTGGTGCTGATGTTTGTGCTTATAACGGGGTGTTTTGTTCTCCAGCTCTTGACAATGCGAAGCTCAACGTTGTTGCTGGCGTTGATCTCAATCACGCTGACATTGCTGGTCACCTTCCACCTGAGCTTGGACTTTTAACCGACATGGCCTTGTTTCATATAAACTCAAATAGGTTTTGTGGGATTGTGCCTAAGAGCATGTCAAGATGCAAACTAATGTACGAGTTTGATATTAGTAACAATCGCTTTGTTGGCCCTTTTCCGGACGTAGTCCTTACATGGCCCGGTGTTAAATACATGGACCTTAGGTTTAATGATTTTGAGGGTCCATTGCCACAAGATCTCTTCTTGAAGGAACTCGATGCATTGTTCTTGAATAACAATCGATTTACATCGACCATCCCTGATACAATCGGCAAATCGACAGTCACTGTTGTTACATTTGCATACAACAAGTTCACTGGATGCATTCCAAGAACCATTGGCAACATGCCCAACTTGAATGAGATCCTCTTCTTGGGCAATGAACTTAGAGGTTGCTTCCCGCCAGAAATTGGAAAGCTTCGAAATGTGACAGTATTTGACGCTAGTGACAATATGCTCATCGGAGGTTTACCGAGTAGTCTTTCAGGGTTGAAGAGTATTGAGGAATTAGACATCGCATTTAACAAGTTGTCAGGTTTTGTGCCAGAGGGCATTTGCAAGTTACCTAAGTTGATGAATTTTACGTTCTCTTACAACTATTTTAATATGCAAGCTAAAGCATGTGTACCATCTACTAAACTTCATGGAGAAGCATTGGCGTTGGATGATAGAAGCAATTGTTTGGACGGTAGGCCAAACCAAAAGCCTCATCATGAATGTTTACAAGTTGTGACAAAACCAGTTGATTGTAGTAAGAATTGCGGTGCCTATTCAACCCCGTCACAACCAACTACTCCTCAGCTATCTCCAGCTCCAGTTGAGAATCATCCATCACCTGCACCACCCACAATATTGTCGCCAACATCAACTCCTATTCTACCAGTTCCAACCCCTGTGCAGCCACCAACAACAACACTTGTTCAACCAGCACCGACACCATTGCTGCCACCTACTCCAATTCAAGAAGTGCCAACCCCAGTCCCGGTACAGGTATCGACTCCTAATTCCCCAATGACGACACCAATGCCTCCCCAGGTACAAGATCCCATCCCACCAGAGGCATCACCAATTCCTCCACAAGTGGCGATTCCCATTCCATCAGCTCCCGTTCCATCAGTGGATGGACCAAAACCTCCACAAGTATCAGTTCCCATTCCATCCGTGATTGAACCGATACCTCCACAAGTATCTGCTCCCGTTCCATCCATGGTTGAATCCATACCTCCACAAGTGTCGCCTCCCACTCCACCAGTGGTAGAACCAATACCTCCACAAGTGTCACCTCCCGCTCCACAAATGGCCACACCAATTCCTCCACCAGTATCGGCTCATGTTCCGTCCATACCAACACCAGCTTTACCAACTCCTAATGATTCGAATACTCAATCTCCTACACCAAGGACACATCCAAATTTACCTGCACCATCACCAAAGCCAACAGCCCCTACACCAAATAACCCCAATATTCAGTCTCCTATATCAAGGACACCACCATCAGTAGCAATCTCAACACCAAGTCCAGAACCGAGTGAGCTAACTAAACAAACTCCAACGGTACAAAATACACCACCAACACCAACACAATCACCGGAAGTAGAGGCACCAACATTTGATGACCCCAACCGTCAGTCTCCCTTGGTACCAGATACACCTCCAACAGAGCAATTAACACCACGACTTGTGGCACCAACGCCAAATGAAATGAATTCACCACCAGTGCCAGCACCAGTTGTACCACCCATTTTCGATGATCCACATCATCAATCTCCTGTGACCCCAACACACCCTGAACCGGTGCAATCACCTCCCCAAGTAGTTCATTCTCTGCCAGCACCAGTCAATTCTCCTCCATCACCACCAGCACATTCACCGCCTCCTCCACCTCCCATTCACTCCCCCCCACCCCCGATCCATTCTCCTCCACCGCCCGTTCACTCTCCCCCACCTCCTATTCAGTCTCCTCCACCAACCCCACCTCCTGTCCACTCCCCTCCACCACCGGTCCACTCTCCCCCACCTCCCACCCACTCTCCTCCCCCACCTCCTGTCCATTCTCCTCCACCGCCAGTTCAATTTTCTCCTCAACCGTTTATTCATTCTTCTCCTCCCCCAGTCAACTCTCCCCCACCACCTCCCCATTCTCCCCCTCCTCCAGTTCAGTCTCCTCCACCACCTGTGCCCTCACCTCCGCCACCAATATTCTCACCACCACCGCCCGCTCCAACTATATCTCCTCCACCTCTAGTTCGTCCACCACCACCAGTCACAGAAGAATTGATATTGCCACCAACCTTCGGGTCTCGTTATCAATCGCCCCCTCCACCCATATTCGCCGGCTACTAG | 2775 | 47.89 | MANPLKKPVALGCLLLFSLFASSSVALSDSEASLIAHRQLTALREFDLLPDKFEFQVDLGALATAFTNDRLKGAYIALQALKNAIYSDPFNNTANWVGADVCAYNGVFCSPALDNAKLNVVAGVDLNHADIAGHLPPELGLLTDMALFHINSNRFCGIVPKSMSRCKLMYEFDISNNRFVGPFPDVVLTWPGVKYMDLRFNDFEGPLPQDLFLKELDALFLNNNRFTSTIPDTIGKSTVTVVTFAYNKFTGCIPRTIGNMPNLNEILFLGNELRGCFPPEIGKLRNVTVFDASDNMLIGGLPSSLSGLKSIEELDIAFNKLSGFVPEGICKLPKLMNFTFSYNYFNMQAKACVPSTKLHGEALALDDRSNCLDGRPNQKPHHECLQVVTKPVDCSKNCGAYSTPSQPTTPQLSPAPVENHPSPAPPTILSPTSTPILPVPTPVQPPTTTLVQPAPTPLLPPTPIQEVPTPVPVQVSTPNSPMTTPMPPQVQDPIPPEASPIPPQVAIPIPSAPVPSVDGPKPPQVSVPIPSVIEPIPPQVSAPVPSMVESIPPQVSPPTPPVVEPIPPQVSPPAPQMATPIPPPVSAHVPSIPTPALPTPNDSNTQSPTPRTHPNLPAPSPKPTAPTPNNPNIQSPISRTPPSVAISTPSPEPSELTKQTPTVQNTPPTPTQSPEVEAPTFDDPNRQSPLVPDTPPTEQLTPRLVAPTPNEMNSPPVPAPVVPPIFDDPHHQSPVTPTHPEPVQSPPQVVHSLPAPVNSPPSPPAHSPPPPPPIHSPPPPIHSPPPPVHSPPPPIQSPPPTPPPVHSPPPPVHSPPPPTHSPPPPPVHSPPPPVQFSPQPFIHSSPPPVNSPPPPPHSPPPPVQSPPPPVPSPPPPIFSPPPPAPTISPPPLVRPPPPVTEELILPPTFGSRYQSPPPPIFAGY | 924 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 10171994 | 10175019 | - | Conep05aG0155000.1 | Cone5ag1503 | 438521 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag1503 | 924 | SUPERFAMILY | L domain-like | 75 | 347 | - | - | |
Cone5ag1503 | 924 | Pfam | Leucine rich repeat N-terminal domain | 77 | 110 | IPR013210 | - | |
Cone5ag1503 | 924 | MobiDBLite | consensus disorder prediction | 409 | 426 | - | - | |
Cone5ag1503 | 924 | MobiDBLite | consensus disorder prediction | 709 | 727 | - | - | |
Cone5ag1503 | 924 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 11 | 834 | IPR051582 | - | |
Cone5ag1503 | 924 | Gene3D | Ribonuclease Inhibitor | 75 | 235 | IPR032675 | - | |
Cone5ag1503 | 924 | FunFam | Pollen-specific leucine-rich repeat extensin-like protein 1 | 74 | 376 | - | - | |
Cone5ag1503 | 924 | Gene3D | Ribonuclease Inhibitor | 236 | 357 | IPR032675 | - | |
Cone5ag1503 | 924 | MobiDBLite | consensus disorder prediction | 401 | 426 | - | - | |
Cone5ag1503 | 924 | MobiDBLite | consensus disorder prediction | 550 | 597 | - | - | |
Cone5ag1503 | 924 | MobiDBLite | consensus disorder prediction | 544 | 924 | - | - | |
Cone5ag1503 | 924 | Pfam | Leucine Rich Repeat | 310 | 332 | IPR001611 | GO:0005515(InterPro) | |
Cone5ag1503 | 924 | MobiDBLite | consensus disorder prediction | 612 | 630 | - | - | |
Cone5ag1503 | 924 | MobiDBLite | consensus disorder prediction | 631 | 678 | - | - | |
Cone5ag1503 | 924 | MobiDBLite | consensus disorder prediction | 735 | 903 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag0166 | Cone-Chr20:717390 | Cone5ag1503 | Cone-Chr5:10171994 | 6.30E-47 | dispersed | |
Cone2ag0284 | Cone-Chr2:1476204 | Cone5ag1503 | Cone-Chr5:10171994 | 1.22E-36 | dispersed | |
Cone4ag0716 | Cone-Chr4:3857442 | Cone5ag1503 | Cone-Chr5:10171994 | 7.68E-40 | dispersed | |
Cone4ag1548 | Cone-Chr4:11925894 | Cone5ag1503 | Cone-Chr5:10171994 | 1.16E-55 | dispersed | |
Cone5ag1503 | Cone-Chr5:10171994 | Cone7ag0673 | Cone-Chr7:3656919 | 4.82E-36 | dispersed | |
Cone5ag1503 | Cone-Chr5:10171994 | Cone17ag1306 | Cone-Chr17:9298742 | 4.50E-57 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag1503 | - | - | - | 0.0 |