Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1503 ATGGCTAATCCTCTCAAAAAGCCAGTAGCGTTAGGCTGCCTTCTTTTATTTTCTCTCTTTGCTTCTTCTTCCGTTGCTCTTTCTGATTCAGAAGCCTCTCTAATCGCTCATCGCCAGTTAACTGCACTTAGAGAATTTGATCTACTTCCTGATAAATTTGAGTTCCAAGTCGATCTTGGAGCTCTAGCTACAGCTTTTACAAATGATAGGCTTAAGGGAGCCTACATTGCTCTTCAAGCATTGAAAAATGCCATATATTCTGACCCATTTAACAACACTGCCAATTGGGTTGGTGCTGATGTTTGTGCTTATAACGGGGTGTTTTGTTCTCCAGCTCTTGACAATGCGAAGCTCAACGTTGTTGCTGGCGTTGATCTCAATCACGCTGACATTGCTGGTCACCTTCCACCTGAGCTTGGACTTTTAACCGACATGGCCTTGTTTCATATAAACTCAAATAGGTTTTGTGGGATTGTGCCTAAGAGCATGTCAAGATGCAAACTAATGTACGAGTTTGATATTAGTAACAATCGCTTTGTTGGCCCTTTTCCGGACGTAGTCCTTACATGGCCCGGTGTTAAATACATGGACCTTAGGTTTAATGATTTTGAGGGTCCATTGCCACAAGATCTCTTCTTGAAGGAACTCGATGCATTGTTCTTGAATAACAATCGATTTACATCGACCATCCCTGATACAATCGGCAAATCGACAGTCACTGTTGTTACATTTGCATACAACAAGTTCACTGGATGCATTCCAAGAACCATTGGCAACATGCCCAACTTGAATGAGATCCTCTTCTTGGGCAATGAACTTAGAGGTTGCTTCCCGCCAGAAATTGGAAAGCTTCGAAATGTGACAGTATTTGACGCTAGTGACAATATGCTCATCGGAGGTTTACCGAGTAGTCTTTCAGGGTTGAAGAGTATTGAGGAATTAGACATCGCATTTAACAAGTTGTCAGGTTTTGTGCCAGAGGGCATTTGCAAGTTACCTAAGTTGATGAATTTTACGTTCTCTTACAACTATTTTAATATGCAAGCTAAAGCATGTGTACCATCTACTAAACTTCATGGAGAAGCATTGGCGTTGGATGATAGAAGCAATTGTTTGGACGGTAGGCCAAACCAAAAGCCTCATCATGAATGTTTACAAGTTGTGACAAAACCAGTTGATTGTAGTAAGAATTGCGGTGCCTATTCAACCCCGTCACAACCAACTACTCCTCAGCTATCTCCAGCTCCAGTTGAGAATCATCCATCACCTGCACCACCCACAATATTGTCGCCAACATCAACTCCTATTCTACCAGTTCCAACCCCTGTGCAGCCACCAACAACAACACTTGTTCAACCAGCACCGACACCATTGCTGCCACCTACTCCAATTCAAGAAGTGCCAACCCCAGTCCCGGTACAGGTATCGACTCCTAATTCCCCAATGACGACACCAATGCCTCCCCAGGTACAAGATCCCATCCCACCAGAGGCATCACCAATTCCTCCACAAGTGGCGATTCCCATTCCATCAGCTCCCGTTCCATCAGTGGATGGACCAAAACCTCCACAAGTATCAGTTCCCATTCCATCCGTGATTGAACCGATACCTCCACAAGTATCTGCTCCCGTTCCATCCATGGTTGAATCCATACCTCCACAAGTGTCGCCTCCCACTCCACCAGTGGTAGAACCAATACCTCCACAAGTGTCACCTCCCGCTCCACAAATGGCCACACCAATTCCTCCACCAGTATCGGCTCATGTTCCGTCCATACCAACACCAGCTTTACCAACTCCTAATGATTCGAATACTCAATCTCCTACACCAAGGACACATCCAAATTTACCTGCACCATCACCAAAGCCAACAGCCCCTACACCAAATAACCCCAATATTCAGTCTCCTATATCAAGGACACCACCATCAGTAGCAATCTCAACACCAAGTCCAGAACCGAGTGAGCTAACTAAACAAACTCCAACGGTACAAAATACACCACCAACACCAACACAATCACCGGAAGTAGAGGCACCAACATTTGATGACCCCAACCGTCAGTCTCCCTTGGTACCAGATACACCTCCAACAGAGCAATTAACACCACGACTTGTGGCACCAACGCCAAATGAAATGAATTCACCACCAGTGCCAGCACCAGTTGTACCACCCATTTTCGATGATCCACATCATCAATCTCCTGTGACCCCAACACACCCTGAACCGGTGCAATCACCTCCCCAAGTAGTTCATTCTCTGCCAGCACCAGTCAATTCTCCTCCATCACCACCAGCACATTCACCGCCTCCTCCACCTCCCATTCACTCCCCCCCACCCCCGATCCATTCTCCTCCACCGCCCGTTCACTCTCCCCCACCTCCTATTCAGTCTCCTCCACCAACCCCACCTCCTGTCCACTCCCCTCCACCACCGGTCCACTCTCCCCCACCTCCCACCCACTCTCCTCCCCCACCTCCTGTCCATTCTCCTCCACCGCCAGTTCAATTTTCTCCTCAACCGTTTATTCATTCTTCTCCTCCCCCAGTCAACTCTCCCCCACCACCTCCCCATTCTCCCCCTCCTCCAGTTCAGTCTCCTCCACCACCTGTGCCCTCACCTCCGCCACCAATATTCTCACCACCACCGCCCGCTCCAACTATATCTCCTCCACCTCTAGTTCGTCCACCACCACCAGTCACAGAAGAATTGATATTGCCACCAACCTTCGGGTCTCGTTATCAATCGCCCCCTCCACCCATATTCGCCGGCTACTAG 2775 47.89 MANPLKKPVALGCLLLFSLFASSSVALSDSEASLIAHRQLTALREFDLLPDKFEFQVDLGALATAFTNDRLKGAYIALQALKNAIYSDPFNNTANWVGADVCAYNGVFCSPALDNAKLNVVAGVDLNHADIAGHLPPELGLLTDMALFHINSNRFCGIVPKSMSRCKLMYEFDISNNRFVGPFPDVVLTWPGVKYMDLRFNDFEGPLPQDLFLKELDALFLNNNRFTSTIPDTIGKSTVTVVTFAYNKFTGCIPRTIGNMPNLNEILFLGNELRGCFPPEIGKLRNVTVFDASDNMLIGGLPSSLSGLKSIEELDIAFNKLSGFVPEGICKLPKLMNFTFSYNYFNMQAKACVPSTKLHGEALALDDRSNCLDGRPNQKPHHECLQVVTKPVDCSKNCGAYSTPSQPTTPQLSPAPVENHPSPAPPTILSPTSTPILPVPTPVQPPTTTLVQPAPTPLLPPTPIQEVPTPVPVQVSTPNSPMTTPMPPQVQDPIPPEASPIPPQVAIPIPSAPVPSVDGPKPPQVSVPIPSVIEPIPPQVSAPVPSMVESIPPQVSPPTPPVVEPIPPQVSPPAPQMATPIPPPVSAHVPSIPTPALPTPNDSNTQSPTPRTHPNLPAPSPKPTAPTPNNPNIQSPISRTPPSVAISTPSPEPSELTKQTPTVQNTPPTPTQSPEVEAPTFDDPNRQSPLVPDTPPTEQLTPRLVAPTPNEMNSPPVPAPVVPPIFDDPHHQSPVTPTHPEPVQSPPQVVHSLPAPVNSPPSPPAHSPPPPPPIHSPPPPIHSPPPPVHSPPPPIQSPPPTPPPVHSPPPPVHSPPPPTHSPPPPPVHSPPPPVQFSPQPFIHSSPPPVNSPPPPPHSPPPPVQSPPPPVPSPPPPIFSPPPPAPTISPPPLVRPPPPVTEELILPPTFGSRYQSPPPPIFAGY 924
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10171994 10175019 - Conep05aG0155000.1 Cone5ag1503 438521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1503 924 SUPERFAMILY L domain-like 75 347 - -
Cone5ag1503 924 Pfam Leucine rich repeat N-terminal domain 77 110 IPR013210 -
Cone5ag1503 924 MobiDBLite consensus disorder prediction 409 426 - -
Cone5ag1503 924 MobiDBLite consensus disorder prediction 709 727 - -
Cone5ag1503 924 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 11 834 IPR051582 -
Cone5ag1503 924 Gene3D Ribonuclease Inhibitor 75 235 IPR032675 -
Cone5ag1503 924 FunFam Pollen-specific leucine-rich repeat extensin-like protein 1 74 376 - -
Cone5ag1503 924 Gene3D Ribonuclease Inhibitor 236 357 IPR032675 -
Cone5ag1503 924 MobiDBLite consensus disorder prediction 401 426 - -
Cone5ag1503 924 MobiDBLite consensus disorder prediction 550 597 - -
Cone5ag1503 924 MobiDBLite consensus disorder prediction 544 924 - -
Cone5ag1503 924 Pfam Leucine Rich Repeat 310 332 IPR001611 GO:0005515(InterPro)
Cone5ag1503 924 MobiDBLite consensus disorder prediction 612 630 - -
Cone5ag1503 924 MobiDBLite consensus disorder prediction 631 678 - -
Cone5ag1503 924 MobiDBLite consensus disorder prediction 735 903 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0166 Cone-Chr20:717390 Cone5ag1503 Cone-Chr5:10171994 6.30E-47 dispersed
Cone2ag0284 Cone-Chr2:1476204 Cone5ag1503 Cone-Chr5:10171994 1.22E-36 dispersed
Cone4ag0716 Cone-Chr4:3857442 Cone5ag1503 Cone-Chr5:10171994 7.68E-40 dispersed
Cone4ag1548 Cone-Chr4:11925894 Cone5ag1503 Cone-Chr5:10171994 1.16E-55 dispersed
Cone5ag1503 Cone-Chr5:10171994 Cone7ag0673 Cone-Chr7:3656919 4.82E-36 dispersed
Cone5ag1503 Cone-Chr5:10171994 Cone17ag1306 Cone-Chr17:9298742 4.50E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1503 - - - 0.0