Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1534 ATGGATTCTGCAAGGAGTTGGTTTCAGAAATTGCAAAGTCGAGAAAAAACTGAGCTTGAGAAGAAGAAGGAAACAGTAAATGTAAAAGATGGTGATAATCAACCTTCAACCTCAACAAAACAGAAAGTTGAGGCGGCAAAGCAGTATATTGAGAACCATTACAAATGTCAAATGAAGTCTTTGCAAGAAAGAAAGGAGAGGCAAGTTTTCCGTATGTTACGTTGGGTGATGGAAAGGAGGCTTGCTGATGCTGATGTTTCTGAGGAAGATCAAATGAATGTTCTGAAATATTTAGAGCAGAAGGAATCTGAATATATGCGTCTAAGAAGACATAAAATGGGCGTTGATGACTTTGAACTTTTGACAATTATAGGAAGGGGTGCATTCGGGGAGGTGAGGCTTTGCAGAGAAAAAGCTACAGGTCATGTGTATGCCATGAAAAAGCTTAAGAAATCTGAGATGCTTAGAAGAGGCCAGGTGGAACATGTTAAAGCTGAAAGAAATCTTCTAGCAGAGGTTGATAGTGCTTACATCGTCAAGCTCTACTGTTCATTCCAAGATGATGACTTTTTATATCTAATTATGGAATATCTTCCTGGGGGTGATATGATGACATTACTCATGCGCAAGGACACTTTGACTGATGATGAGGCCAGATTTTACATTGGGGAAACTGTCCTTGCCATTGAATCTATTCACAAACACAATTACATTCACAGGGACATCAAGCCAGACAATTTGCTACTCGACCGATATGGCCACCTTAGACTTTCAGATTTTGGATTGTGTAAGCCCTTGGACTCTAGTAGTTTCCCTAATAATCTAAGTGAGCCTGAGAATGTAATGGGAAGGAAGTCATCTGCGAAGAATGAAAATTCGTCTAGCTTGCCCCCTATTACGAGAAGGACACAACAGGAACAGTTGTTGCATTGGCAAAAAAACAGGCGAACTCTGGCTTATTCAGCTGTTGGAACTCCAGATTACATTGCCCCAGAAGTGCTGCTGAGGAAAGGTTATGGAATGGAGTGTGACTGGTGGTCTCTGGGAGCAATCATGTATGAGATGCTTGTGGGGTACCCACCTTTTTATTCTGAAGATCCAATGTCAACATGCCGAAAGATTGTAAACTGGAGAGCTCATTTGAAATTTCCACACGAGGCAAAGCTGTCTACTGAGGCTAAAGATCTCATTTACAAGCTTTTGTGCAACGTTGAGCAAAGGCTTGGAACAAAAGGAGCTCATGAAATCAAAGTGCACCCATGGTTTAAAGGTCTACGATGGGATAGACTTTATCAAATGGAAGCTGCTTTTATCCCAGAGGTGAATGATGAGTTGGATACTCAGAATTTTGAAAAGTTTGAGGAGTTGGGAGCTACAGATCAGAACCCATCAAAGTCAGGTCCTGGGAGAAAGATGCTCTCGTCAAAGGATGTGAATTTTGTTGGTTATACATATAAGAATTTTGAGATCGTCAATGAGCATCAACTTTCTGGTATCGCCGAGGTAAAGAAAAAGACTATCAAGCAAAAGAAACCATCTGTTAAATCATTATTTGACCCACCCGGGCATCCTCCCATTCAGCCTGTACCAAGAAGCTTGCCAGCCAAATAA 1611 41.15 MDSARSWFQKLQSREKTELEKKKETVNVKDGDNQPSTSTKQKVEAAKQYIENHYKCQMKSLQERKERQVFRMLRWVMERRLADADVSEEDQMNVLKYLEQKESEYMRLRRHKMGVDDFELLTIIGRGAFGEVRLCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSAYIVKLYCSFQDDDFLYLIMEYLPGGDMMTLLMRKDTLTDDEARFYIGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDSSSFPNNLSEPENVMGRKSSAKNENSSSLPPITRRTQQEQLLHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGMECDWWSLGAIMYEMLVGYPPFYSEDPMSTCRKIVNWRAHLKFPHEAKLSTEAKDLIYKLLCNVEQRLGTKGAHEIKVHPWFKGLRWDRLYQMEAAFIPEVNDELDTQNFEKFEELGATDQNPSKSGPGRKMLSSKDVNFVGYTYKNFEIVNEHQLSGIAEVKKKTIKQKKPSVKSLFDPPGHPPIQPVPRSLPAK 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10521986 10527392 + Conep05aG0158100.1 Cone5ag1534 438552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1534 536 MobiDBLite consensus disorder prediction 510 536 - -
Cone5ag1534 536 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 490 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cone5ag1534 536 Pfam Protein kinase domain 319 422 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1534 536 Pfam Protein kinase domain 119 270 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1534 536 MobiDBLite consensus disorder prediction 16 42 - -
Cone5ag1534 536 SMART pkinase_C_6 423 487 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1534 536 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524(InterPro)
Cone5ag1534 536 MobiDBLite consensus disorder prediction 518 536 - -
Cone5ag1534 536 Gene3D Transferase(Phosphotransferase) domain 1 317 440 - -
Cone5ag1534 536 Gene3D Transferase(Phosphotransferase) domain 1 202 270 - -
Cone5ag1534 536 ProSiteProfiles Protein kinase domain profile. 118 422 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1534 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone5ag1534 536 SUPERFAMILY Protein kinase-like (PK-like) 99 469 IPR011009 -
Cone5ag1534 536 FunFam Non-specific serine/threonine protein kinase 321 440 - -
Cone5ag1534 536 FunFam Non-specific serine/threonine protein kinase 202 269 - -
Cone5ag1534 536 MobiDBLite consensus disorder prediction 274 298 - -
Cone5ag1534 536 CDD MobB_NDR_LATS-like 46 113 - -
Cone5ag1534 536 CDD STKc_NDR_like 116 486 - -
Cone5ag1534 536 SMART serkin_6 118 422 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1534 536 ProSiteProfiles AGC-kinase C-terminal domain profile. 423 495 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1534 536 Gene3D Phosphorylase Kinase; domain 1 116 201 - -
Cone5ag1534 536 Gene3D Phosphorylase Kinase; domain 1 441 451 - -
Cone5ag1534 536 Pfam Protein kinase C terminal domain 441 485 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1534 536 FunFam Non-specific serine/threonine protein kinase 89 201 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0254 Cone-Chr16:2793920 Cone5ag1534 Cone-Chr5:10521986 2.11E-77 dispersed
Cone20ag0786 Cone-Chr20:5530425 Cone5ag1534 Cone-Chr5:10521986 4.41E-271 dispersed
Cone2ag0776 Cone-Chr2:33726449 Cone5ag1534 Cone-Chr5:10521986 1.29E-77 dispersed
Cone4ag1678 Cone-Chr4:12544530 Cone5ag1534 Cone-Chr5:10521986 2.46E-219 dispersed
Cone5ag1534 Cone-Chr5:10521986 Cone7ag1274 Cone-Chr7:9450042 1.24E-211 dispersed
Cone5ag1534 Cone-Chr5:10521986 Cone15ag0165 Cone-Chr15:793624 9.09E-279 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82884 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1534 K08790 - csv:101208438 852.818