Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone5ag1553 | ATGGAGGAAGTAGCATCATGGTCCTCATATCCCTTCTTCCTTTACACATCCTTTCTTATCTTCCTTCTCCTTATTATCCCAAAACTTAAACTTATGATCTTCTCAAAACAAACACTTACAAGAGAGAAGCTTCCACCAAGTCCACCTTCGTTGCCTATAATTGGCCATCTTCATCTCTTGAAACAACCAATTCACCAAACGCTAGAACATCTCTCACAAAAGTATGGTCCAATCTTCTCGCTCTCCTTCGGATCACGCACCGTTTTGATCATCTCATCACTCTCTTCCGTCAAAGAATCCTTTACCAAAAACGACATCATTTTGGCAAATAGGCCTCGTCTTCTCTCTGGCAAACACTTAAACTATGACTACACCACCCTCGGGGCTGTCTCCTACGGTCCACTTTGGCGCAACCTCCGACGTATATCTACTCTAGAAATCTTCTCCACGACCCGTCTTAACATGTTTTCGAGTATTAGAGAAGAAGAAGTGAAGTTCTTGTTGAAGAACTTGTTTGAGAATGTCTCAAGCCAAAAAGGGTTGTTTGTGAAAGTGGAAATGAGGTCAAGATTATCAGAACTGTCTTTTAATATCATAATGAGGATGCTTAGTGGGAAGAGGTATTTTGGTAATGAAATAGAAGGAGATTGTAATAATATTGAGGAGGCTAAAGAATTTAGAGATATTATCAGAGAGACTCTTGAATTGAGTGGAGCATCAAGTGTTGGAGATTATATAGGGTTCTTAAGGTGGATTGATTTTGACGGTTTGGAAAAAAGAATGAAGAGATTGGGTAGGAGGGCAGATGGGTTCTTGCAAGGTTTGATTGATGAACATAGAGTCAATAAATTACAAGGTGGTGAGGCCAAAAAGACTATGATTGACAATATGTTGTCTTTACAAGAATCAGAACCCGATATTTACTCTGATCAAGTTATCAAAGCTCTCATACTAAATCTGCTAACTGCCGGGACGGACACATCAGCAGTGACACTAGAGTGGGCCATGTCACTGCTCCTCAATAATCCAACGGTGATAAAGAAGGCAATTACAGAGATCAAAAACCAAGTCGGTTCCAATCATTTGGTGAACGAATCAGATTTACCCAAACTCAAATACATCCAAAATATAGTAAAAGAGACCCTTAGATTATACCCAGCAGCCCCACTATTGGTCCCACACTTGTCATCAGAGGATTGCACAATTGAAGGGTTTGATGTAGAAAAAGACACAATTGTAATGGTCAATGCATGGGCCATTCATAGGGACCCACTGATTTGGGTGGAACCTACAAGTTTCAAGCCAGAGAGATATGTTGACGGTCATGACGAAGGGTATAGATTTATACCATTTGGGGTGGGGAGGAGAAGTTGCCCAGGTGCTGGGTTGGCTAATAGAGTGGTTGGGTTAGCATTGGCTGTATTGATTCAATGTTTTGAATGGGAAAGAGTTGGAGTTGAAAATGTTGATATGGGTGAAGGGTTAGGGCTCACTATGCCTAAGGCTGTGCCATTAGAAGCTATATGTAAAGCTCGTAGTTCGATGATTAGTGTTCTATCGGAATTGTAA | 1569 | 40.85 | MEEVASWSSYPFFLYTSFLIFLLLIIPKLKLMIFSKQTLTREKLPPSPPSLPIIGHLHLLKQPIHQTLEHLSQKYGPIFSLSFGSRTVLIISSLSSVKESFTKNDIILANRPRLLSGKHLNYDYTTLGAVSYGPLWRNLRRISTLEIFSTTRLNMFSSIREEEVKFLLKNLFENVSSQKGLFVKVEMRSRLSELSFNIIMRMLSGKRYFGNEIEGDCNNIEEAKEFRDIIRETLELSGASSVGDYIGFLRWIDFDGLEKRMKRLGRRADGFLQGLIDEHRVNKLQGGEAKKTMIDNMLSLQESEPDIYSDQVIKALILNLLTAGTDTSAVTLEWAMSLLLNNPTVIKKAITEIKNQVGSNHLVNESDLPKLKYIQNIVKETLRLYPAAPLLVPHLSSEDCTIEGFDVEKDTIVMVNAWAIHRDPLIWVEPTSFKPERYVDGHDEGYRFIPFGVGRRSCPGAGLANRVVGLALAVLIQCFEWERVGVENVDMGEGLGLTMPKAVPLEAICKARSSMISVLSEL | 522 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 10799009 | 10800721 | + | Conep05aG0160100.1 | Cone5ag1553 | 438571 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone5ag1553 | 522 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 451 | 460 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone5ag1553 | 522 | PRINTS | P450 superfamily signature | 323 | 340 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | PRINTS | P450 superfamily signature | 449 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | PRINTS | P450 superfamily signature | 376 | 387 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | PRINTS | P450 superfamily signature | 458 | 469 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | CDD | CYP81 | 76 | 505 | - | - | |
| Cone5ag1553 | 522 | PANTHER | CYTOCHROME P450 82C3-RELATED | 25 | 513 | IPR050651 | - | |
| Cone5ag1553 | 522 | Gene3D | Cytochrome P450 | 35 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | PRINTS | E-class P450 group I signature | 194 | 212 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | PRINTS | E-class P450 group I signature | 416 | 440 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | PRINTS | E-class P450 group I signature | 448 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | PRINTS | E-class P450 group I signature | 96 | 117 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | PRINTS | E-class P450 group I signature | 312 | 329 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | PRINTS | E-class P450 group I signature | 458 | 481 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | PRINTS | E-class P450 group I signature | 72 | 91 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | PRINTS | E-class P450 group I signature | 332 | 358 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | PRINTS | E-class P450 group I signature | 375 | 393 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | FunFam | Cytochrome P450 family protein | 36 | 515 | - | - | |
| Cone5ag1553 | 522 | Pfam | Cytochrome P450 | 45 | 498 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag1553 | 522 | SUPERFAMILY | Cytochrome P450 | 45 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone5ag1553 | Cone-Chr5:10799009 | Cone9ag1354 | Cone-Chr9:10143679 | 4.22E-193 | dispersed | |
| Cone5ag1553 | Cone-Chr5:10799009 | Cone7ag1261 | Cone-Chr7:9368226 | 2.98E-196 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone5ag1553 | K13260 | - | vvi:100260801 | 620.928 |