Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1569 ATGATGCAGCTCTGGTTCCTGCGCTGGCAGGTCTCCTTGTTCTACACGCTATTCCTCTTCCATCTCTATGAAGCGCAACAAATCTATCTTAACAACAAACAGTTCAACTGCTACAATAACATCAACTACACCAAAGGATTCTCCTGCAATGGCGTCTCCCCTTCCTGCAAATCCTACCTCACCTTCAGATCCAATCCTCCTTACAACACTCCTTCTAACATAGCTTACTTACTCAGCTCCGACACCAATCTCATCGCCGCCGCTAACAACATCTCCGCCGTCGATATCATCCCGACGAACACTCAGCTCATCGTCCCCGTCAACTGCTCCTGCTCCGGCCTTTACTACCAGCACAACGCGTCTTACATTCTCAAGTACTCTTCCGAAACCTATTTCATCGTTTCGAACAACACCTATCAAGGACTCACGACCTGTCAAGCGATGATGGATCAGAATCCGTACGGAGATCGAAATCTCACCGTCGGTCTGAATCTCCACGTTCCTCTGCTATGCGCTTGTCCAACCTCGAACCAGTCCTCTAAGGGCGTCAAGTATCTCCTCAATTACATGGTCACATGGAACGAAGACATTTCCTCAATCGCAAAATTGTTCGGCGTAGATCGACAATCTATCCTCGACGCTAACGATCTAACAAACTCGAGCATCATTTATCCGTTCAATCCGGTTCTAGTTCCTCTCTCTAACGAGCCTAAAAGGATCGAACCTATAACTTCTCCATCTCCACCACCGTCCCCAAATTCCCCTCCTCCTAGGGTTTCCAGTAAGAACAGCAAAAAATCTGTTTTTATAGGTGTTGGAATCGGAGCAGCTGTTTTACTTCTTCTCCTTCTGTCCCTAATCTTCTTCTTTTTCTGCCGATCTCGGAAGGAAAAGAACCTTCCGGTTTCGGCAACTGCAGCAAATCCAATACTTACGGAATCTTCCGACTACTCGATACCAGAATCGAAGCCCTGGTCAATTTCATCTGAAGGAGTCCGGTCCACTATCGATTCTTTGATCATATATAATCTAGAGGATTTGCAGAAAGCGACCAACTTCTTTAGCGACGGAAACAGGATCAAGGGCACTGTGTATAAAGGCTCATTCAGGGGAGATGCTGCTGCTGTAAAGGTAATGGAAGGGGATGTATCTAGAGAAATCGACATACTAATGAAGATCAATCACACAAATATTGTAAGATTATCCGGATTCTGTTTCCATGGCGGAAATAGCTACCTCGTTTACGAGTATGCAGATAACGGCTCTTTACGTGATCAGCTCGACAATTCTAAAAAGTTCCGGAACACTAATAGGGTTTTGTCATGGAAGCAGAGGGTCCAGGTTGCTTATGATGTAGCAGATGCCTTGAACTACCTTCATAACTATGCTAACCCTCCATATATGCATAAGAATTTGAAGAGCAGCAACATTCTATTAGATGGGAGTTTTCGAGCCAAGATTACCAATTTCGGGTTGGCAAGAATGGTGGTAATTGATGAAAAAGAAGAACAAGACGGAGAAGAAAAAGGGTTTCAGTTGACCAGACATGTGGTTGGTACCTACGGATATATGGCTCCGGAGTATATCGAAAACGGAGTTATTACTCCGAATTTAGATGTGTTTGCTTTTGGGGTTGTGATTTTAGAGATTATTTCTGGGAAGGAAGCTGCTGTTGGGGAAAATAACAGGGGAGAAGAGTTGTTGTCAGTAGCTATAAGTCATGTGCTTGAAGGAGAAAATGTTAGGGAGAAGCTTCGAGCATTCATGGATTCTTCGCTGAGGGATGAGTATCCTTTAGAATTGGCATTTTCCATGGCTCAGCTTGCTTGCACATGTGTTGCTCGGGATCTTAATTCCCGCCCGTCTGTGTCCAACGCATTAGTGACGCTCTCTAAGATCCTTTCGTCTTCGTTGAATTGGGATCCGACTGAGGAGCTGGAAAGATCTAGATCAATACCAACTCATAGCAGATGA 1974 44.83 MMQLWFLRWQVSLFYTLFLFHLYEAQQIYLNNKQFNCYNNINYTKGFSCNGVSPSCKSYLTFRSNPPYNTPSNIAYLLSSDTNLIAAANNISAVDIIPTNTQLIVPVNCSCSGLYYQHNASYILKYSSETYFIVSNNTYQGLTTCQAMMDQNPYGDRNLTVGLNLHVPLLCACPTSNQSSKGVKYLLNYMVTWNEDISSIAKLFGVDRQSILDANDLTNSSIIYPFNPVLVPLSNEPKRIEPITSPSPPPSPNSPPPRVSSKNSKKSVFIGVGIGAAVLLLLLLSLIFFFFCRSRKEKNLPVSATAANPILTESSDYSIPESKPWSISSEGVRSTIDSLIIYNLEDLQKATNFFSDGNRIKGTVYKGSFRGDAAAVKVMEGDVSREIDILMKINHTNIVRLSGFCFHGGNSYLVYEYADNGSLRDQLDNSKKFRNTNRVLSWKQRVQVAYDVADALNYLHNYANPPYMHKNLKSSNILLDGSFRAKITNFGLARMVVIDEKEEQDGEEKGFQLTRHVVGTYGYMAPEYIENGVITPNLDVFAFGVVILEIISGKEAAVGENNRGEELLSVAISHVLEGENVREKLRAFMDSSLRDEYPLELAFSMAQLACTCVARDLNSRPSVSNALVTLSKILSSSLNWDPTEELERSRSIPTHSR 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10950545 10952854 + Conep05aG0161700.1 Cone5ag1569 438587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1569 657 MobiDBLite consensus disorder prediction 242 257 - -
Cone5ag1569 657 Gene3D Transferase(Phosphotransferase) domain 1 419 648 - -
Cone5ag1569 657 Gene3D LysM domain 187 240 IPR036779 -
Cone5ag1569 657 CDD LysM 189 225 IPR018392 -
Cone5ag1569 657 MobiDBLite consensus disorder prediction 238 262 - -
Cone5ag1569 657 Pfam LysM domain 189 232 IPR018392 -
Cone5ag1569 657 Pfam Protein kinase domain 379 627 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1569 657 ProSiteProfiles Protein kinase domain profile. 350 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1569 657 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 11 644 IPR052611 -
Cone5ag1569 657 FunFam PTI1-like tyrosine-protein kinase 3 418 644 - -
Cone5ag1569 657 Gene3D Phosphorylase Kinase; domain 1 322 417 - -
Cone5ag1569 657 SUPERFAMILY Protein kinase-like (PK-like) 327 627 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1317 Cone-Chr17:9332103 Cone5ag1569 Cone-Chr5:10950545 4.63E-114 dispersed
Cone5ag1569 Cone-Chr5:10950545 Cone6ag1352 Cone-Chr6:10877275 6.09E-139 dispersed
Cone16ag0984 Cone-Chr16:9727813 Cone5ag1569 Cone-Chr5:10950545 1.84E-67 transposed
Cone10ag1382 Cone-Chr10:10765041 Cone5ag1569 Cone-Chr5:10950545 7.01E-40 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82886 PF07714 PK_Tyr_Ser-Thr 7.10E-44 CL0016 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1569 - - - 0.0