Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1593 ATGGCTGCTGCGACATTGGCCATTGGCACGACTGGGGCTATAGCTATGGGGGCCGGATTGGCAGCGAGAGGGACAGCTTCAGAAGCAGCTATGGTTGCAGGGGCTTGGGAGACGCTTCTTGTTGTTTTAGTCATTCACTCGGCTTGGATTTGTCCATTCAAGATGGCATTTCTTACATACAAGCAAAATACTGCACTTTTCATCGTTGACAACATCCTCAATGGCTTCTTTGCAATTGACATTATTCTCACCTTCTTTGTTGCATATCTTGACACCCAATCTCAGCTTCTTGTTGATGACCCCAAAAGAATTGCTATTCGGTACATATCTACCTGGTTTATTTTCGATATCTGTTCTACTGTACCATTTCAGTCTATAAGCATCCTCTTCACAAATCATACAAACGAACTTGGGTTTGAGTTGCTCAATATGCTCAGACTCTGGAGACTAAGAAGGGTCAGCTCCTTGTTTTCTAGACTTGAGAAAAATATCAGGTTCAATTATTTCTGGACTCGCTGCATAAAGCTCATCTCTGTAACTCTTTTTGCAGTACACTGTGCTGGATGCTTGAACTATCTGATTGCAGATAAATACCCTGATCCAAAACAAACATGGATTGGTGCAGTGAATCCAAATTTCAAAAAAGATAGTATTGGGACAAGATATGTAACAGCAATTTACTGGTCTATCACAACTCTAACTACAACTGGTTATGGTGATTTGCATGCTCAAAATCCGAGAGAGATGCTGTTTTATATCTTTTACATGCTGTTCAACTTGGGATTGACATCTTACCTTGTAGGAAACATGACAAACCTTGTAGTTCACTGGACAAGCCAAACAAGTAACTTTAGAGACAGAGTTACAGCTGCTTCAGAATTTTCATCACGACACAACTTGCCCCCTCAGATCGAGCATCAAATTGTGTCGCATGTCTGCCTAAAGTTAAGACAGGAAAGATTGAAAAAGCAAGAGACCTTAAATTGTCTGCCTAAAGCCATTCGCTCAAGCATTGCACAATACCTCTTTCTTCCCATTGCTCAAAAAGTCTATCTCTTCCAAGGTGTTTCTCACAACTTCCTTTTCCAACTGGTATCAGAAATGGAGGCCGAGTATTTCCCTCCAAAGGAAGATGTAATTCTGCAAAATGAGGATTCAACAAATCTTTATATACTGATCTCAGGAAGTGTGATGACTTTAAATTGTTTCTTATACTTGCAACAGGTTTATGAACAGGCAGTTGCAGGAGATGTGTTCGGAGAGGTTGGAGTCTTATGTCAAAGGCCACAACCTTTCACAGTTCGGACCACCAACATTTCTCAAATACTACAACTCAAGAGAACTTCATTGACGCATACCATACAATCTAATAGACAAGATGAAGACATCCTTATGAGCAATCTTTTCCTGAAACTCAAGGGGCAAGAAAGCAACAGCTTTGCACAAGCTCAAATGGACCCAACTAGAGGTTGCCCTTCTCAGACAAGATATCAAGAGAATTTTTCAGGTGTTCCATCAAAATAA 1524 40.68 MAAATLAIGTTGAIAMGAGLAARGTASEAAMVAGAWETLLVVLVIHSAWICPFKMAFLTYKQNTALFIVDNILNGFFAIDIILTFFVAYLDTQSQLLVDDPKRIAIRYISTWFIFDICSTVPFQSISILFTNHTNELGFELLNMLRLWRLRRVSSLFSRLEKNIRFNYFWTRCIKLISVTLFAVHCAGCLNYLIADKYPDPKQTWIGAVNPNFKKDSIGTRYVTAIYWSITTLTTTGYGDLHAQNPREMLFYIFYMLFNLGLTSYLVGNMTNLVVHWTSQTSNFRDRVTAASEFSSRHNLPPQIEHQIVSHVCLKLRQERLKKQETLNCLPKAIRSSIAQYLFLPIAQKVYLFQGVSHNFLFQLVSEMEAEYFPPKEDVILQNEDSTNLYILISGSVMTLNCFLYLQQVYEQAVAGDVFGEVGVLCQRPQPFTVRTTNISQILQLKRTSLTHTIQSNRQDEDILMSNLFLKLKGQESNSFAQAQMDPTRGCPSQTRYQENFSGVPSK 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11198970 11205891 - Conep05aG0164100.1 Cone5ag1593 438611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1593 507 PANTHER POTASSIUM CHANNEL AKT1 35 486 IPR045319 GO:0005249(InterPro)|GO:0006813(InterPro)
Cone5ag1593 507 Pfam Cyclic nucleotide-binding domain 372 457 IPR000595 -
Cone5ag1593 507 Gene3D Jelly Rolls 319 488 IPR014710 -
Cone5ag1593 507 FunFam Potassium channel KAT2 340 476 - -
Cone5ag1593 507 CDD CAP_ED 352 465 IPR000595 -
Cone5ag1593 507 Gene3D - 35 275 - -
Cone5ag1593 507 Pfam Ion transport protein 35 281 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone5ag1593 507 SMART cnmp_10 352 469 IPR000595 -
Cone5ag1593 507 SUPERFAMILY Voltage-gated potassium channels 34 275 - -
Cone5ag1593 507 PRINTS EAG/ELK/ERG potassium channel family signature 70 80 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone5ag1593 507 PRINTS EAG/ELK/ERG potassium channel family signature 81 90 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone5ag1593 507 PRINTS EAG/ELK/ERG potassium channel family signature 222 239 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone5ag1593 507 PRINTS EAG/ELK/ERG potassium channel family signature 248 259 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone5ag1593 507 PRINTS EAG/ELK/ERG potassium channel family signature 266 275 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone5ag1593 507 SUPERFAMILY cAMP-binding domain-like 279 468 IPR018490 -
Cone5ag1593 507 MobiDBLite consensus disorder prediction 481 507 - -
Cone5ag1593 507 FunFam Potassium channel KAT3 35 276 - -
Cone5ag1593 507 ProSiteProfiles cAMP/cGMP binding motif profile. 352 471 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag1593 Cone-Chr5:11198970 Cone7ag0655 Cone-Chr7:3406157 5.05E-170 dispersed
Cone5ag1593 Cone-Chr5:11198970 Cone6ag0891 Cone-Chr6:4562253 4.10E-243 wgd
Cone5ag1593 Cone-Chr5:11198970 Cone9ag0896 Cone-Chr9:4384732 2.44E-239 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1593 K21867 - mdm:103444001 657.521