Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1604 ATGAAGGTGGCGCACCTGAAAGAAGCATGGAACGCAACCCTATTCGTCGGAAAATTCCTCTGTGGTCTCCACCTCACCAACACTTACCTCTGCACCCCCACTTTCACCTATGGTCCTAGTATGGTTCCAACCTTGAATCTAAACGGCGATTTCCTCTTGACCGAACGGATCTCCTCCCGGTTTGGAAAAGTCGGCCCCGGAGACATTGTAATCGTTCGGTCTCCGCAGAATCCTCGCAAAGTCGTCACTAAACGCTGTTTGGCCATGGAGGGCGAGTCTATTACCTTTGTCGTTGATCCCAAAAACAGTGATGAGTGCCAGACAATCGTGGTTCCTAAGGGACACATTTGGATAGAGGGTGATAACATCTATGATTCCAATGATTCGAGGAAATTTGGTGCACTCCCTTATGGCCTTGTTGAAGGCAAAATTTTCTTGAGGATATGGCCTCCTGAAAGTTTTGGACCATTGGGAAAAGATAGCAGGAGGAATGATCCGGTCCCGTGA 507 48.52 MKVAHLKEAWNATLFVGKFLCGLHLTNTYLCTPTFTYGPSMVPTLNLNGDFLLTERISSRFGKVGPGDIVIVRSPQNPRKVVTKRCLAMEGESITFVVDPKNSDECQTIVVPKGHIWIEGDNIYDSNDSRKFGALPYGLVEGKIFLRIWPPESFGPLGKDSRRNDPVP 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11259903 11262003 - Conep05aG0165200.1 Cone5ag1604 438622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1604 168 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 6 157 IPR052064 GO:0006627(PANTHER)|GO:0042720(PANTHER)
Cone5ag1604 168 Pfam Signal peptidase, peptidase S26 23 96 IPR019533 GO:0004252(InterPro)|GO:0006465(InterPro)
Cone5ag1604 168 Pfam Signal peptidase, peptidase S26 105 149 IPR019533 GO:0004252(InterPro)|GO:0006465(InterPro)
Cone5ag1604 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 111 130 IPR000223 GO:0006508(InterPro)|GO:0008236(InterPro)|GO:0016020(InterPro)
Cone5ag1604 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 29 45 IPR000223 GO:0006508(InterPro)|GO:0008236(InterPro)|GO:0016020(InterPro)
Cone5ag1604 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 82 94 IPR000223 GO:0006508(InterPro)|GO:0008236(InterPro)|GO:0016020(InterPro)
Cone5ag1604 168 SUPERFAMILY LexA/Signal peptidase 28 157 IPR036286 -
Cone5ag1604 168 Gene3D Umud Fragment, subunit A 26 163 - -
Cone5ag1604 168 FunFam Inner membrane protease subunit 1 27 156 - -
Cone5ag1604 168 CDD S26_SPase_I 33 144 IPR019533 GO:0004252(InterPro)|GO:0006465(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag1604 Cone-Chr5:11259903 Cone13ag1397 Cone-Chr13:10117948 9.58E-24 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1604 K09647 - csv:101209167 245.743