Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1631 ATGGAGACAAAGAGCGTGGTGAGGTTTAAACTAGGGAAACAGTCGTCGTTAGCGCCGGAGAGTGATCGAGGAGTGGTGGCGGAGAAGGAGGCGGCTGTGCAGGAGGACGGGCAACCGCAGGATGATGTGGTGGAGATAGATCCGAGAGTGAGGTTGATGTATTTAGCTAACGAAGGTGATATCGAGGGGATTAAGGAGCTTTTGGATTCTGGAATCGACGTTAATTTCAGGGATATTGATGGTCGGACTGCTCTTCATGTCGCTGCTTGCCAGGGATTTACCGACGTCGTTGATTTCTTGCTCCGGCGAGGCGCGGTTGTTGACACCAAAGATCGATGGGGGAGCACGCCCCTTGCAGATGCTCTACACTACAGAAAGCATGATGTGATCAACCTTTTGGAGAGTCATGGTGCAAAGCCTTTGATGGCTCCAATGCACGTCAAAAATGCCCGTCAAGTTCCAGAATATGAAATTGATGCTAAAGAACTCGATTTTACCAACAGTGTGGAGATAACTAAGGGAACCTTCAGGATAGTATCATGGCGTGGAACAGAGGTTGCTGTAAAAATGCTTGAGGAGGATGTGTTTACTGACGAGGATAGAGTGAGAGCATTCAGAGATGAGCTTGCTCTACTCCAGAAGATTCGGCATCCAAATGTCGTACAGTTTCTGGGTGCTGTAACTCAAAGTAGTCCAATGATGATTCTTACAGAATATTTGCCCAAGGGTGATCTTTGTGCATTCTTGAAAAAAAAAGGAGCATTAAAGCCAATGACTGCTGTGAGATATGCCCTCGATATTGCAAGGGGAATGAATTACTTGCATGAGAATAAGCCAGAACCAATCATTCACCGTGATCTTGAGCCTTCAAATATATTGCGGGATGACTCTGGACACCTGAAAGTTGCAGACTTCGGTTTAAGCAAGTTGCTGACAGTAAAAGAAGACAAACCTCTAATCTGTCAAGATGCTTCTTGCCGATATGTGGCTCCTGAGGTCTTCAAAAATGAAGAGTATGATACGAAAGTGGATGTATTCTCATTTGCCTTAATTCTTCAAGAGATGATCGAAGGCTGTCCGCCATTTACTGGCAAACAAGAGAATGAAGTACCTAAAATATATGCTGCAAAAGAACGCCCTCCTTTTAGAGCTTCAGCTAGATATTATGCTCATGGACTGAGAGAGTAA 1188 45.12 METKSVVRFKLGKQSSLAPESDRGVVAEKEAAVQEDGQPQDDVVEIDPRVRLMYLANEGDIEGIKELLDSGIDVNFRDIDGRTALHVAACQGFTDVVDFLLRRGAVVDTKDRWGSTPLADALHYRKHDVINLLESHGAKPLMAPMHVKNARQVPEYEIDAKELDFTNSVEITKGTFRIVSWRGTEVAVKMLEEDVFTDEDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMILTEYLPKGDLCAFLKKKGALKPMTAVRYALDIARGMNYLHENKPEPIIHRDLEPSNILRDDSGHLKVADFGLSKLLTVKEDKPLICQDASCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTGKQENEVPKIYAAKERPPFRASARYYAHGLRE 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11519173 11522687 - Conep05aG0168300.1 Cone5ag1631 438649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1631 395 MobiDBLite consensus disorder prediction 23 39 - -
Cone5ag1631 395 FunFam Integrin-linked protein kinase family 30 156 - -
Cone5ag1631 395 MobiDBLite consensus disorder prediction 14 39 - -
Cone5ag1631 395 ProSiteProfiles Ankyrin repeat region circular profile. 80 112 - -
Cone5ag1631 395 ProSiteProfiles Ankyrin repeat profile. 80 112 IPR002110 GO:0005515(InterPro)
Cone5ag1631 395 Pfam Protein kinase domain 180 369 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1631 395 SUPERFAMILY Ankyrin repeat 51 142 IPR036770 -
Cone5ag1631 395 ProSiteProfiles Protein kinase domain profile. 165 395 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag1631 395 Gene3D Transferase(Phosphotransferase) domain 1 241 392 - -
Cone5ag1631 395 Gene3D - 18 156 IPR036770 -
Cone5ag1631 395 FunFam serine/threonine-protein kinase STY46-like 158 241 - -
Cone5ag1631 395 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 66 384 IPR051681 GO:0004674(PANTHER)
Cone5ag1631 395 SMART ANK_2a 113 142 IPR002110 GO:0005515(InterPro)
Cone5ag1631 395 SMART ANK_2a 47 76 IPR002110 GO:0005515(InterPro)
Cone5ag1631 395 SMART ANK_2a 80 109 IPR002110 GO:0005515(InterPro)
Cone5ag1631 395 Gene3D Phosphorylase Kinase; domain 1 157 240 - -
Cone5ag1631 395 SUPERFAMILY Protein kinase-like (PK-like) 164 383 IPR011009 -
Cone5ag1631 395 PIRSF ILK 2 395 - -
Cone5ag1631 395 Pfam Ankyrin repeats (3 copies) 52 140 IPR002110 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0934 Cone-Chr13:8097746 Cone5ag1631 Cone-Chr5:11519173 5.05E-92 dispersed
Cone19ag0927 Cone-Chr19:7148842 Cone5ag1631 Cone-Chr5:11519173 1.31E-92 dispersed
Cone5ag1631 Cone-Chr5:11519173 Cone8ag0943 Cone-Chr8:9024987 7.62E-95 dispersed
Cone1ag0233 Cone-Chr1:1509819 Cone5ag1631 Cone-Chr5:11519173 1.92E-233 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82887 PF04153 NOT2_3_5 1.40E-24 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1631 - - - 0.0