Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1682 ATGCGGAAGGGTTCGAAGAGCAATTGCAAGTCAGTGTCCCATAAGCTCTTTAAGGACAAGGCAAAGAACCGGGTTGATGATCTGCAGAGTATGTTCACGGATCTGCACTATGCAAGGAAGGAAAGCCGGTCAGTTGATGTGTCGGTTCTTGAGGAGCAAGTCCACCAGATGCTTCGTGAGTGGAAAGCTGAGCTCAATGAACCTTCTCCGGCATCTTCCTTGCAACAAGGTGGGAGTCTGGGGTCATTTTCGTCTGACATTTGCTGGCTTCTGCAACTTTATGAGGAGGAAGATGATGCAACTAGCCCATTAGCTGCACCAAAGCCTGAGCCTAATGATCATGCATTGCCAGTTGGAGACACTATGGCATTTCGTGAGGGGCTTAATGTGAATCATGGGCAGCAAGAACAAGGTTTTCCACTGGTCGATCCATGCAGAAACCTTCCTTTAGTGGCTCACAATGTTACTACTAATAACTTGGAAAGGCATGCTCACTTGGAGTATCAGCACCATGATTTTCATCAAGAATTTGATCACAACCTCTTTCCTGGATTTAATGCCATGTGTGGGGAAGATACTGTGCCTCAGATTTCTAGCTATTTGCCAAGCATATGTCCACCACCTTCTGCTTTCTTGGGCCCAAAATGTGCACTTTGGGATTGTCCAAGGCCAGCTCAAGGGCTGGATTGGTGTCAAGATTATTGCAGCAGCTTTCATGCTGCTCTAGCATTGAATGAAGGCCCACCTGGAATGTGCCCCGTTCTACGACCTGGAGGCATTGGCCTGAAAGATGGTTTGCTTTTTTCCACGCTTGGGGCAAAGGCACAAGGAAAAGATGTTGGTATCCCAGAATGCGAGGGAGCGGCTACTGCAAAGTCTCCATGGAATGCACCTGAACTCTTTGATCTTTCGGTTCTGGAGGGTGAGTTGATAAGGGAGTGGCTATTTTTTGATAAGCCCAGAAGAGCATTCGAGAGTGGGAATAGAAAGCAGAGGTCCTTACCAGATTACAATGGACGTGGTTGGCATGAATCAAGGAAGCAAGTGATGAATGAATTTGGAGGATTGAAGAGATCCTACTACATGGACCCACAACCATTGAACCATTTTGAATGGCATCTTTATGAATATGAGATGAACAAATATGATTCGTGCGCCTTGTACAGGTTAGAGCTTAAACTTGTAGATGGGAAGAAAAACTCCAAGGGGAAAATCACAAATGAGTCACTTGCTGATTTGCAGAAGCAAATGGGGAGGCTCTCTGCTGAATTTCCATCCGATAATAATAAGCGGAATATTAAGGGGAGAGTGAAAATTAACACAAAGGTCGGGATTGGAAATGTTTATCCGAATCTCAATCGAGCCCCCCCAACAAATGGAACATTTGATTATGCGCTAAGTGCTCAGTATGATTATCTTGTTGAGAATATAGGTGAGTATTACTTGACATAA 1452 45.11 MRKGSKSNCKSVSHKLFKDKAKNRVDDLQSMFTDLHYARKESRSVDVSVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSSDICWLLQLYEEEDDATSPLAAPKPEPNDHALPVGDTMAFREGLNVNHGQQEQGFPLVDPCRNLPLVAHNVTTNNLERHAHLEYQHHDFHQEFDHNLFPGFNAMCGEDTVPQISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMCPVLRPGGIGLKDGLLFSTLGAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGELIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEMNKYDSCALYRLELKLVDGKKNSKGKITNESLADLQKQMGRLSAEFPSDNNKRNIKGRVKINTKVGIGNVYPNLNRAPPTNGTFDYALSAQYDYLVENIGEYYLT 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11969071 11972717 - Conep05aG0173600.1 Cone5ag1682 438700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1682 483 PANTHER TRANSCRIPTION FACTOR VOZ1 1 481 IPR039277 GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0045893(PANTHER)|GO:0048578(PANTHER)|GO:0048578(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1260 Cone-Chr10:9687871 Cone5ag1682 Cone-Chr5:11969071 1.23E-167 dispersed
Cone1ag0187 Cone-Chr1:1066913 Cone5ag1682 Cone-Chr5:11969071 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46231 None None None None Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1682 - - - 0.0