Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1767 ATGTTCCTAGTTGCGACCTTGTCTCCTCCTCTTGCAAATGCGCAAGGGTTGAAAGTAGGGTTTTATGCAAAAACATGTCCACAAGCTGAGACGATTGTGACGAAGATTATTGATGATGGCATGTCAAAAGCACCTTCACTTTCTGGTCCCTTGTTGAGAATGCATTTTCATGATTGCTTTGTTAGGGGTTGCGATGGTTCGGTGTTATTGAACTCTTCGACTAATCAAGCCGAGAAAGATGCAAATCCGAATCAAAGTCTTCGAGGGTTCACCTTAATCGACAGGGTGAAATCTGCATTAGAGAAAGCTTGTCCAGGAGTTGTATCATGTGCTGATATCTTGGCCTTGGTCGCTAGAGATGTCGTAGTTGCGGTACATGGACCTTCATGGGAAGTTGAAACCGGAAGAAGAGATGGAAACGTTTCAATCATAACAGAAGCGTTGTCGGATCTAGTACCCCCTACGGCAAATATCACTGATCAGATATTAAGATTCCAACAGAAAGGTCTTAGTGTAAAGGATTTGGCGGTGCTAGCAGGGGGACACACAATCGGCACTTCTCACTGTCCGCCAATCAACAACCGCCTTTATAACTTCACCGGAAAGGGCGATACCGATCCCACTTTGGATCCCAACTACATTGTACATTTGAAGCAAAAGTGCAGACCAAATGACCAGACTACACTTATAGAGATGGATCCAGGAAGCTACAAGACTTTTGATGTGGGTTATTACACACTTGTGGCCAAAAGGAGGGGGTTGTTTCAATCTGATGCTGCTCTACTTGATGATAGTGAAACAAAAGCTTATGTGAAAAACGCCATTGCCGATCATGGGTCATCTTTCTTCAAGGATTTTGGAGTATCTATGGTGAATATGGGAAGGATCGGAGTTCTTACTGGTAATGCAGGTGAAATTAGGAAACAATGTAGCAAGGTTAATTAG 945 43.49 MFLVATLSPPLANAQGLKVGFYAKTCPQAETIVTKIIDDGMSKAPSLSGPLLRMHFHDCFVRGCDGSVLLNSSTNQAEKDANPNQSLRGFTLIDRVKSALEKACPGVVSCADILALVARDVVVAVHGPSWEVETGRRDGNVSIITEALSDLVPPTANITDQILRFQQKGLSVKDLAVLAGGHTIGTSHCPPINNRLYNFTGKGDTDPTLDPNYIVHLKQKCRPNDQTTLIEMDPGSYKTFDVGYYTLVAKRRGLFQSDAALLDDSETKAYVKNAIADHGSSFFKDFGVSMVNMGRIGVLTGNAGEIRKQCSKVN 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12566731 12568031 - Conep05aG0182200.1 Cone5ag1767 438785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1767 314 Gene3D - 20 314 - -
Cone5ag1767 314 ProSiteProfiles Plant heme peroxidase family profile. 16 314 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 CDD secretory_peroxidase 16 313 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone5ag1767 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 PRINTS Plant peroxidase signature 126 141 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 PRINTS Plant peroxidase signature 50 70 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 PRINTS Plant peroxidase signature 88 101 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 PRINTS Plant peroxidase signature 107 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 PRINTS Plant peroxidase signature 173 185 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 PRINTS Plant peroxidase signature 26 45 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 ProSitePatterns Peroxidases active site signature. 48 59 IPR019794 GO:0004601(InterPro)
Cone5ag1767 314 PRINTS Haem peroxidase superfamily signature 126 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 PRINTS Haem peroxidase superfamily signature 48 62 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 PRINTS Haem peroxidase superfamily signature 108 125 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 PANTHER PEROXIDASE 25-RELATED 13 310 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone5ag1767 314 FunFam Peroxidase 152 293 - -
Cone5ag1767 314 Pfam Peroxidase 35 274 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 FunFam Peroxidase 20 164 - -
Cone5ag1767 314 SUPERFAMILY Heme-dependent peroxidases 16 314 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone5ag1767 314 Gene3D Peroxidase, domain 2 152 293 - -
Cone5ag1767 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 174 184 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0624 Cone-Chr2:3952389 Cone5ag1767 Cone-Chr5:12566731 3.50E-57 dispersed
Cone5ag1767 Cone-Chr5:12566731 Cone8ag1448 Cone-Chr8:11200470 7.03E-134 dispersed
Cone12ag1389 Cone-Chr12:10249372 Cone5ag1767 Cone-Chr5:12566731 9.91E-132 wgd
Cone5ag1767 Cone-Chr5:12566731 Cone6ag1208 Cone-Chr6:9431302 1.51E-69 wgd
Cone5ag1767 Cone-Chr5:12566731 Cone8ag1447 Cone-Chr8:11197714 2.73E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1767 K00430 - vvi:100262330 466.848