Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag1852 | ATGGACAAAGGATGGAGACTAACCCTTCCCGATCCTAAATCTAGGTTGTTCTTCTTAAACAAGACGCCAGCAGCTCAACAAGCTTATTCTCTTTTAGACGGCCTTGACCCTTCTTCCAGAAACAACAACATCATAGGCGCTGATCAACGGTGTCTTCCTCATCAACCGGCGAGAATGTTTCAGGGTATTCAATTTCCGTTGAAGCTCCGTCGAACCAGCGGAGAAGAAGTAGAGGAGGATAGTCAAGCTGCAGCTGCTCCGACACAGTCTGATCTTGACCAAGATCACGAGAACCGATTGGTTGTGGATGAAGTGGATTTCTTCTCGGATAAGAAAAGGGTGGTTGATAATTATGTGGGTGATGATCATGACGCCGATAAGGATGTCAAGAAGACTAGTGTGATTAGTGTCAAGAAGGAAAAGGACAGTATATCTCATGGAGATCAAGTGCCTCAGCTGTCTCATCACTTGAATATTGCCAATGTTAATACTGGTTTACACCTGCAAACTGCCAACACTGGAAGCGACCAATCAACCGTGGATGACGGGATTTCAACGGACGCCGAGGATAAGAGAGCCAAGAATATGGAGCTGGCACAGCTGCAAGTGGAGCTTCAACGCATGTTAACGGAGAATCAGAAGTTGAGAGAGATGCTAAGCCAAGTGAACAGCAACTACCATTCTCTGCAGATGCGTTTTATGTCATTCATGCAGCACCAGCACCAGCAACAGCAACAGCACCACCAACTTCAGAATAACGTTGATCAAGGACAATCTGGTAATCATGATGAGAAACACGAATCTGTTGGAGGTAGAGTGGTGGTTCCAAGACAATTTATGGATCCAGGGCCAGTCTCTGAAACCGATCATGAGGCCGTGTCTCATTCTTCTTCCGATGAAAGAACTCGTTCTGGAACCCCCCTTGGTCACTCTGAAAAGATCAAGACTAGTACAAGTACTACTCCGCCTCCCAAAAATGCTGATCCTTCAATACCATTTGATCATCACGCGACCGACACTGACTCTGGTTTCAGAGATGGAAAGAGAATTGCAAGGGAGGAGAGCCCTGAATCAGAGTCACATGGTTGGGGTCCTAACAAAGTTGCTAAATTGAGCTCCCCAAAACCCATTGATCAATCGACTGAGGCCACCATGAGGAAAGCCCGCGTTTCTGTTCGTGCTCGTTCAGAAGCTCCCATGATTACAGATGGGTGCCAATGGCGGAAATATGGACAAAAGATGGCAAAAGGGAACCCATGTCCAAGAGCTTATTATAGGTGCACCATGTCAGTTGGCTGTCCGGTTCGCAAACAAGTTCAACGGTGTGCGGAAGACAGAAGCATATTGATAACAACGTACGAGGGCAACCACAACCACCCTCTCCCTCCAGCAGCGATGGTCATGGCATCAACAACAGCCGCAGCTGCAAGCATGTTGCTGTCAGGGAGCCTGCCCAGTGCAGACGGGCTCATGAACCCTAATCTGCTAGCCAGAGCCATTCTTCCAAACTGCTCGTCCAGCATGGCCACCATTTCAGCATCAGCTCCATTTCCAACAGTAACCTTGGACCTCACTCACTCCCCAGGCCCCAACCCCTTGCAGTTCCAGCAGGCCCAGCAGATGAGACCAGCTGTTTCCACCACACAATTCCAGCTTCCTACTTTCCATCACGGCAACGGCAACGTCCCTCATCATCAGTTGCCTCAGGTTTTAAGTAAAGCACTACTCTACAACCAGTCCATGTTCTCGGGCCTCCAGCTCTCCGGCGCTGGTCATGACATTCTGTCTGCCCACAGTTTAGCACAACAAGTTACTCCACAGCCGCTTTCTGATACATTAAGCGCTGCTACTGCCGCCATCACTTCTGATCCAAACTTTACAGCAGCTCTTGCAGCTGCCATTTCTTCCATCATCGGTGGGGCTCACCCCAACAATAATAGCGGTAGCAACGGCAACAGTACTAGCAACAAAGTCAGCAGTTTTCTAGGAAATTAA | 1995 | 48.62 | MDKGWRLTLPDPKSRLFFLNKTPAAQQAYSLLDGLDPSSRNNNIIGADQRCLPHQPARMFQGIQFPLKLRRTSGEEVEEDSQAAAAPTQSDLDQDHENRLVVDEVDFFSDKKRVVDNYVGDDHDADKDVKKTSVISVKKEKDSISHGDQVPQLSHHLNIANVNTGLHLQTANTGSDQSTVDDGISTDAEDKRAKNMELAQLQVELQRMLTENQKLREMLSQVNSNYHSLQMRFMSFMQHQHQQQQQHHQLQNNVDQGQSGNHDEKHESVGGRVVVPRQFMDPGPVSETDHEAVSHSSSDERTRSGTPLGHSEKIKTSTSTTPPPKNADPSIPFDHHATDTDSGFRDGKRIAREESPESESHGWGPNKVAKLSSPKPIDQSTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMSVGCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAAMVMASTTAAAASMLLSGSLPSADGLMNPNLLARAILPNCSSSMATISASAPFPTVTLDLTHSPGPNPLQFQQAQQMRPAVSTTQFQLPTFHHGNGNVPHHQLPQVLSKALLYNQSMFSGLQLSGAGHDILSAHSLAQQVTPQPLSDTLSAATAAITSDPNFTAALAAAISSIIGGAHPNNNSGSNGNSTSNKVSSFLGN | 664 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 12997959 | 13000751 | + | Conep05aG0191100.1 | Cone5ag1852 | 438870 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag1852 | 664 | MobiDBLite | consensus disorder prediction | 332 | 360 | - | - | |
Cone5ag1852 | 664 | MobiDBLite | consensus disorder prediction | 299 | 324 | - | - | |
Cone5ag1852 | 664 | ProSiteProfiles | WRKY domain profile. | 396 | 462 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone5ag1852 | 664 | MobiDBLite | consensus disorder prediction | 237 | 382 | - | - | |
Cone5ag1852 | 664 | SUPERFAMILY | WRKY DNA-binding domain | 394 | 462 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone5ag1852 | 664 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 179 | 644 | IPR044810 | GO:0003700(InterPro) | |
Cone5ag1852 | 664 | MobiDBLite | consensus disorder prediction | 643 | 664 | - | - | |
Cone5ag1852 | 664 | MobiDBLite | consensus disorder prediction | 237 | 258 | - | - | |
Cone5ag1852 | 664 | FunFam | probable WRKY transcription factor 31 | 386 | 463 | - | - | |
Cone5ag1852 | 664 | Pfam | WRKY DNA -binding domain | 403 | 460 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone5ag1852 | 664 | MobiDBLite | consensus disorder prediction | 71 | 96 | - | - | |
Cone5ag1852 | 664 | Coils | Coil | 191 | 232 | - | - | |
Cone5ag1852 | 664 | Gene3D | WRKY domain | 386 | 463 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone5ag1852 | 664 | SMART | WRKY_cls | 401 | 461 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone5ag1852 | Cone-Chr5:12997959 | Cone8ag1424 | Cone-Chr8:11102295 | 4.90E-91 | dispersed | |
Cone1ag0014 | Cone-Chr1:120101 | Cone5ag1852 | Cone-Chr5:12997959 | 0 | wgd | |
Cone20ag0815 | Cone-Chr20:5790000 | Cone5ag1852 | Cone-Chr5:12997959 | 2.46E-20 | wgd | |
Cone3ag1328 | Cone-Chr3:32232091 | Cone5ag1852 | Cone-Chr5:12997959 | 1.30E-96 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46252 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag1852 | - | - | - | 0.0 |