Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0035 ATGACACAAATGATCGAGAGTTTGGGGAATCCTGTTAATGAACCTCGGCTTGTTGTGAGAAAGTTTCTGGCGTGGTCTCAACATGAAGGAGTGGGTGCTATTGTTAGAAGGAGCATAGGACGGTTTGAGGTTGGGTACTTTGATCCTTTTCTTGCCTTGGATGAATTTTCAGTCACTGCTCCTGCTGGATTTCCTGATCATCCACATAGAGGGTTTGAGACAGTGACATACATGCTGCAGGGAGCTGTAACACACGAAGATTTTGAAGGACACAGAGGAACGATAGGTGCCGGTGATTTACAATGGATGACGGCCGGAAGAGGAATAGTTCATTCAGAAATGCCTGCAGGCCCAGGCACCCAAAAGGGCTTACAGCTCTGGGTCAACCTCTCCTCCAAATACAAAATGATAGAACCGAGGTATCAGGAAATGCGTAGTGGGGACATTGCAGAAGCTGAAGAAGATGGAGTAAAAGTCAGAGTAATTGCAGGGGAGTCCTTGGGAACAAAGTCTCCAATCCACACAACAACTCCTACCATGTACTTGGACTTTACCCTCAAACCAGGAGCTAATCTTCAACAGCCAATACCCATGTCTTGGAATGCATTTGTTTACGTCTTAGAAGGCGACGGTATTTTCGGAAGTCTAGAGTCATCCTCTACGGCGGCACATTACCTTCTTCTTCTGGGCTCTGGGGATGGTTTGGAGGTATGGAACAAGTCCAGTAAGCCACTCAGGTTTGTCTTAGTAGGGGGTGAGCCATTGGGTGAACCTGTTGCGCAGTATGGGCCGTTTGTGATGAACACCCAGGAAGAGATTAATCAGACAATAGATGATTTTGAGAATTGCACAAATGGATTTGAGAGAGTTAGACAATGGAAATCAGAAGCTGCTTGTCGCCTTGCTTTCTGA 912 46.38 MTQMIESLGNPVNEPRLVVRKFLAWSQHEGVGAIVRRSIGRFEVGYFDPFLALDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHRGTIGAGDLQWMTAGRGIVHSEMPAGPGTQKGLQLWVNLSSKYKMIEPRYQEMRSGDIAEAEEDGVKVRVIAGESLGTKSPIHTTTPTMYLDFTLKPGANLQQPIPMSWNAFVYVLEGDGIFGSLESSSTAAHYLLLLGSGDGLEVWNKSSKPLRFVLVGGEPLGEPVAQYGPFVMNTQEEINQTIDDFENCTNGFERVRQWKSEAACRLAF 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 209648 211008 - Conep06aG0003500.1 Cone6ag0035 438919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0035 303 Pfam Pirin 37 128 IPR003829 -
Cone6ag0035 303 PIRSF Pirin 14 294 IPR012093 -
Cone6ag0035 303 FunFam pirin 29 166 - -
Cone6ag0035 303 CDD cupin_pirin_C 178 254 - -
Cone6ag0035 303 Gene3D Jelly Rolls 29 281 IPR014710 -
Cone6ag0035 303 Pfam Pirin C-terminal cupin domain 181 286 IPR008778 -
Cone6ag0035 303 PANTHER PIRIN-RELATED 12 296 IPR012093 -
Cone6ag0035 303 CDD cupin_pirin_N 33 130 - -
Cone6ag0035 303 SUPERFAMILY RmlC-like cupins 16 295 IPR011051 -
Cone6ag0035 303 Gene3D Jelly Rolls 150 255 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0035 Cone-Chr6:209648 Cone9ag0037 Cone-Chr9:158582 1.39E-203 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0035 K06911 - rcu:8277559 499.975