Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0036 ATGTGTACCTCACGCGCTTCCGTTATTCATCTGGCTCTACTTCTTCACTCTGTATTGACTTTAGTCTCTGCTCAGGGATCTAAATCTAATACCACTTCTCACTGGCAGACTCTAAGCGGAGATCCTCCTTTTGTCGTGGCACGTGGGGGGTTCTCAGGGTTGTTTCCTGATTCCAGTTCAAATGCATACAGTTTTGCATTGATTGTCAGCGTGCCTGATTTGATCTTATGGTGTGATGTGCAATTAACAAAGGATGGAGCTGGAATTTGCCTTCCAGATCTGAAGATGGATAATTCTACTAACATAGGAGATGTTTTTAAGAAAGAGCAGAAAGTGTATCTCGTCAATGGAGTCCCTACAAGTGGATGGTTTTCTGTGGATTACACTCTGAAAGAGCTTAGCGGTGTTTTCCTCAATCAAGGTGTCTATTCTCGCTCAAATAAGTTTGATGGCAGTTCCTTCCCAATTCTCACTGTTCCAGATGTTGCTGACTTCAAGCCACCCGGTCTGTGGTTGAATATTCAGCATGATGCTTTCTACACACAGCACAATTTGAGTATGAGAACCTTTGTACTTTCTGTATCGAGAAGTGTTATTGTCAATTATGTATCATCACCAGAAGTTGCTTTTCTTAAAAGTGTTGAAGCAAGATTTCGTCCAAGCACGACAAAACTTGTGTTTCGATTTTTAGGACAAGATGCTTTGGAGCCTACGACAAATCAGACTTATGGTTCCCTCTTGAAAAATCTTACACTTATCAAGACCTTTGCTTCTGGAATTCTTGTTCCCAAGTCTTACATATGGCCTGTAGATGATAATTATTTACTACCTCATACGCCTCTAGTCTCAGATGCTCATAAATTAGGCTTGGAAGTTTTTGCATCAGAGTTCTACAATGACATTCCACTTAGCTACAATTACAGTTATGATCCAATTTCTGAGTACTTGGGTTACATTGACAACGGCGAATTTTCAGTCGACGGTGTGCTCTCGGATTTCCCGATAACACCATCAGAAGCCATTGATTGCTTTGCTCATCTCGGGAAAAATGATAAACCACAAGCAACGCCTTTGGTTATCTCAAAATGTGGAGCTAGTGGAGACTATCCGGGTTGTACTGACTTGGCTTATAGCAAGGCTATATTAGACGGTGTGGATGTACTTGACTGTCCAGTTCAAATGGCGCAGGATGGGACACCATTCTGCTTAAGCTCCATAAATCTTATTGATAGTACAACAGTAGCTCAAACAACTTTTAACACCCTTACCAAAGAAATTCCAGCAATTAAGAGTGGTACTGGAATCTTTGCCTTTGACCTGACATGGCCTCAGATTCAAAGTTTGACTCCATCAATAGCAAATCCTTTCTCAGACTTCACATTGTTTCGGAACCCCAAGTTCAAAAACAGTGGAACATTTCTCACATTGTCTGATTTCTTGTCCTTGACCAAGAATACAAGCAGTCTTTCTGGTGTGCTGATCAAGATAGAGCATGCGGCCTACCTCGCTGAGGAGCAGGACTTAAGTGTAACTGATGCTGTCCTGTCAGTCTTGAGTAAGTCTGGCTATGACAATCAGACAGCCAAGAAAGTTATGATTCAATCTACAAACAGCTCTGTTTTAATGAAATTCCAAGGGAAAAACAATTATCATCTTGTATACGAGGTTGATGAGGCTATTCGAGACGTACTTAATTCGACTATCGTGGACATAAAGAGTTTTGCCAGTGCTGTGGTAGTCAGCAAGTCCTCGGTCTTTCCCTTAAGATCAGCATTCCTCACACAGCTTACAGATGTTGTTTCGAAGTTCCAAGCATTCAAGATCCCAGTTTATGTAGAAACCTTTAGTAACGAATTTGTGTCTCAAGCATGGGATTTCCTCTCTGATGCAACTGTGGAGATTAATTCATTTGTAGCGGGCGCCAACATTGATGGTGTCATCACAGATTACCCTAAAACGGCTGCTAGATACAAAAAGAATCGGTGTCTAAATTTAGGCACCAATACACCTCCTTACATGAGTCCTGTTCAGCCTGGTGGTTTGGTGTCATTGATTGAAGGGCCTTATCTCCCACCAGCTGCAGCTCCGAATCCAACATTGACTGATTCGGATGTGGCCGAACCGCCTTTGCCCCCTCTCTCTGCCAAACCTCCCACAAATTCCACAGGTGGTGTATCTACAGCTCCGGCTCCAACACCACCAAATGGCCAGCCCAAGATTACCATATGTTTTTTGCTCTCAAATCTAGCTATACTTCTTTCTGCTCTATTTCTTCTAATTTGA 2283 42.27 MCTSRASVIHLALLLHSVLTLVSAQGSKSNTTSHWQTLSGDPPFVVARGGFSGLFPDSSSNAYSFALIVSVPDLILWCDVQLTKDGAGICLPDLKMDNSTNIGDVFKKEQKVYLVNGVPTSGWFSVDYTLKELSGVFLNQGVYSRSNKFDGSSFPILTVPDVADFKPPGLWLNIQHDAFYTQHNLSMRTFVLSVSRSVIVNYVSSPEVAFLKSVEARFRPSTTKLVFRFLGQDALEPTTNQTYGSLLKNLTLIKTFASGILVPKSYIWPVDDNYLLPHTPLVSDAHKLGLEVFASEFYNDIPLSYNYSYDPISEYLGYIDNGEFSVDGVLSDFPITPSEAIDCFAHLGKNDKPQATPLVISKCGASGDYPGCTDLAYSKAILDGVDVLDCPVQMAQDGTPFCLSSINLIDSTTVAQTTFNTLTKEIPAIKSGTGIFAFDLTWPQIQSLTPSIANPFSDFTLFRNPKFKNSGTFLTLSDFLSLTKNTSSLSGVLIKIEHAAYLAEEQDLSVTDAVLSVLSKSGYDNQTAKKVMIQSTNSSVLMKFQGKNNYHLVYEVDEAIRDVLNSTIVDIKSFASAVVVSKSSVFPLRSAFLTQLTDVVSKFQAFKIPVYVETFSNEFVSQAWDFLSDATVEINSFVAGANIDGVITDYPKTAARYKKNRCLNLGTNTPPYMSPVQPGGLVSLIEGPYLPPAAAPNPTLTDSDVAEPPLPPLSAKPPTNSTGGVSTAPAPTPPNGQPKITICFLLSNLAILLSALFLLI 760
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 216015 220827 - Conep06aG0003600.1 Cone6ag0036 438920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0036 760 ProSiteProfiles GP-PDE domain profile. 43 341 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone6ag0036 760 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 41 340 - -
Cone6ag0036 760 CDD GDPD_SHV3_repeat_2 357 657 - -
Cone6ag0036 760 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 10 735 - GO:0008889(PANTHER)
Cone6ag0036 760 SUPERFAMILY PLC-like phosphodiesterases 357 658 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone6ag0036 760 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 340 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone6ag0036 760 Gene3D Phosphatidylinositol (PI) phosphodiesterase 355 658 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone6ag0036 760 ProSiteProfiles GP-PDE domain profile. 357 658 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone6ag0036 760 Pfam Glycerophosphoryl diester phosphodiesterase family 364 653 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone6ag0036 760 Pfam Glycerophosphoryl diester phosphodiesterase family 78 313 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone6ag0036 760 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 355 658 - -
Cone6ag0036 760 SUPERFAMILY PLC-like phosphodiesterases 42 340 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone6ag0036 760 CDD GDPD_SHV3_repeat_1 43 340 - -
Cone6ag0036 760 MobiDBLite consensus disorder prediction 696 733 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0905 Cone-Chr13:7978120 Cone6ag0036 Cone-Chr6:216015 5.61E-23 dispersed
Cone2ag0798 Cone-Chr2:33999576 Cone6ag0036 Cone-Chr6:216015 2.24E-21 dispersed
Cone6ag0036 Cone-Chr6:216015 Cone7ag0583 Cone-Chr7:2797196 1.19E-190 dispersed
Cone14ag1192 Cone-Chr14:9726814 Cone6ag0036 Cone-Chr6:216015 0 wgd
Cone15ag1212 Cone-Chr15:9632991 Cone6ag0036 Cone-Chr6:216015 0 wgd
Cone6ag0036 Cone-Chr6:216015 Cone9ag0039 Cone-Chr9:167576 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0036 - - - 0.0