Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0067 ATGGAAGGGATTGTTGTTAGAAGGGTTATTCCATCAGACAACAGTTGCCTCTTCAATGCTGTAGGGTATGTCATGGACCATGACCAAAAGAAGGCCCCTGAGCTAAGACAGGTCATAGCTGCAACAGTAGCTAGTGATCCATCAAATTATTCTGAAGCATTTCTTGGAAAGCCAAACAACGAGTATTGTGCTTGGATTTTTGACTCAGAGAAGTGGGGAGGTGCAATTGAGCTTTCGATATTAGCAGAGTATTATGGTCGTGAAATTGCAGCATATGATATCCAGACCACAAGATGTGATTTGTATGGTCAGGAAAAGGGTTATTCAGAAAGAGTTATGCTGATTTACAATGGGCTACACTATGACGCTTTAGCCGTTTCTCCATTCAAAGGGGCTCCCGAGGAATTCGACCAGACTGTATTCCCTGTGCAGATGGACAGAAAGATTGGACCAGTTGAAGGGCTAGCTCTCCATTTTGTTAAAGACCAACAAAGATAA 498 42.77 MEGIVVRRVIPSDNSCLFNAVGYVMDHDQKKAPELRQVIAATVASDPSNYSEAFLGKPNNEYCAWIFDSEKWGGAIELSILAEYYGREIAAYDIQTTRCDLYGQEKGYSERVMLIYNGLHYDALAVSPFKGAPEEFDQTVFPVQMDRKIGPVEGLALHFVKDQQR 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 353580 356030 - Conep06aG0006700.1 Cone6ag0067 438951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0067 165 FunFam ubiquitin thioesterase OTU1 1 165 - -
Cone6ag0067 165 Pfam OTU-like cysteine protease 11 116 IPR003323 -
Cone6ag0067 165 Gene3D - 1 164 - -
Cone6ag0067 165 CDD OTU_plant_OTU1_2-like 3 165 - -
Cone6ag0067 165 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Cone6ag0067 165 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 5 165 - GO:0004843(PANTHER)|GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0016579(PANTHER)|GO:0030433(PANTHER)|GO:0030968(PANTHER)
Cone6ag0067 165 SUPERFAMILY Cysteine proteinases 8 124 IPR038765 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0067 Cone-Chr6:353580 Cone9ag0082 Cone-Chr9:363697 1.52E-114 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0067 K13719 - gmx:100499809 295.049