Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag0067 | ATGGAAGGGATTGTTGTTAGAAGGGTTATTCCATCAGACAACAGTTGCCTCTTCAATGCTGTAGGGTATGTCATGGACCATGACCAAAAGAAGGCCCCTGAGCTAAGACAGGTCATAGCTGCAACAGTAGCTAGTGATCCATCAAATTATTCTGAAGCATTTCTTGGAAAGCCAAACAACGAGTATTGTGCTTGGATTTTTGACTCAGAGAAGTGGGGAGGTGCAATTGAGCTTTCGATATTAGCAGAGTATTATGGTCGTGAAATTGCAGCATATGATATCCAGACCACAAGATGTGATTTGTATGGTCAGGAAAAGGGTTATTCAGAAAGAGTTATGCTGATTTACAATGGGCTACACTATGACGCTTTAGCCGTTTCTCCATTCAAAGGGGCTCCCGAGGAATTCGACCAGACTGTATTCCCTGTGCAGATGGACAGAAAGATTGGACCAGTTGAAGGGCTAGCTCTCCATTTTGTTAAAGACCAACAAAGATAA | 498 | 42.77 | MEGIVVRRVIPSDNSCLFNAVGYVMDHDQKKAPELRQVIAATVASDPSNYSEAFLGKPNNEYCAWIFDSEKWGGAIELSILAEYYGREIAAYDIQTTRCDLYGQEKGYSERVMLIYNGLHYDALAVSPFKGAPEEFDQTVFPVQMDRKIGPVEGLALHFVKDQQR | 165 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 353580 | 356030 | - | Conep06aG0006700.1 | Cone6ag0067 | 438951 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag0067 | 165 | FunFam | ubiquitin thioesterase OTU1 | 1 | 165 | - | - | |
Cone6ag0067 | 165 | Pfam | OTU-like cysteine protease | 11 | 116 | IPR003323 | - | |
Cone6ag0067 | 165 | Gene3D | - | 1 | 164 | - | - | |
Cone6ag0067 | 165 | CDD | OTU_plant_OTU1_2-like | 3 | 165 | - | - | |
Cone6ag0067 | 165 | ProSiteProfiles | OTU domain profile. | 5 | 127 | IPR003323 | - | |
Cone6ag0067 | 165 | PANTHER | HIV-INDUCED PROTEIN-7-LIKE PROTEASE | 5 | 165 | - | GO:0004843(PANTHER)|GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0016579(PANTHER)|GO:0030433(PANTHER)|GO:0030968(PANTHER) | |
Cone6ag0067 | 165 | SUPERFAMILY | Cysteine proteinases | 8 | 124 | IPR038765 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone6ag0067 | Cone-Chr6:353580 | Cone9ag0082 | Cone-Chr9:363697 | 1.52E-114 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag0067 | K13719 | - | gmx:100499809 | 295.049 |