Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0079 ATGGCTTGCTCTGTAAGACGATCCTTAACAACACCAATCAATGGCAACGACATTGTTTTGCGGAGGAAAATCTCAGTACGCAAACAGCGATCTTCCTTCTTCCCTTCTCTAACGCTGCAAAAACCTCAAGGACTTTCCTTTTCGGTGCAGAACAAGGTTGTGTATGTTTCTTCTTTGGAAAAAAATATGGGATCAGAGAGAACCGAGAATCATTGTTTGATTAGGTGCAAAACTTTCGAAGCTGACCGTTTTCGGCCGATGGAATTGTCGAGGGATGAGGCAAAATCAGAGGCCGGGAAGAAGGTGAAGATCGGATTGTACTTTGCATTATGGTGGGCATTGAATGTGGTGTTTAATATCTACAACAAGAAGGTTTTGAATGCGTTTCCTTATCCGTGGTTGACCTCAACTCTATGTCTTGCTGTTGGCTCTCTCATCATGCTCGTTTCATGGGCTATAAGGCTTGCTGAGCCACCTAAGACCGACATCGAGTTTTGGAAGACTCTCTTTCCTGTTGCTATAGCTCATACAATAGGACACGTAGCTGCAACAGTGAGTATGTCAAAGGTTGCAGTTTCATTCACGCATATAATAAAGAGTGGTGAGCCTGCTTTTAGTGTTCTGGTCTCAAGATTCTTGTTGGGTGAAACCTTCCCTGCCTCTGTCTACTTGTCCCTTCTCCCCATTATCGGCGGGTGTGGCCTTGCTGCCCTCACAGAGCTCAACTTCAATATGACAGGGTTTATGGGGGCGATGATATCGAATTTAGCATTTGTGTTTCGGAACATATTTTCGAAGAAGGGGATGAAAGGGAAGTCTGTTAGTGGGATGAACTACTATGCTTGTCTTTCTATACTGTCTCTGTTGATTCTTACCCCATTTGCAATTGCTGTGGAGGGACCACAACTCTGGGCTGCCGGTTGGCAAACAGCAGTCTCTCAGATAGGACCTCAATTCGTCTGGTGGGTTGCGGCACAGAGTGTGTTCTATCATCTTTACAATCAAGCGTCATATATGTCCTTGGACGAGATTTCACCTTTATCATTTAGCATTGGAAATACAATGAAGCGCATATCCGTTATAGTCGCATCCATCATCATCTTCCGGACACCTGTTCAGCCAGTCAACGCTCTTGGAGCTGCCATTGCAATCCTTGGAACCTTCTTATACTCTCAGGCAAAACAGTGA 1188 44.87 MACSVRRSLTTPINGNDIVLRRKISVRKQRSSFFPSLTLQKPQGLSFSVQNKVVYVSSLEKNMGSERTENHCLIRCKTFEADRFRPMELSRDEAKSEAGKKVKIGLYFALWWALNVVFNIYNKKVLNAFPYPWLTSTLCLAVGSLIMLVSWAIRLAEPPKTDIEFWKTLFPVAIAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPASVYLSLLPIIGGCGLAALTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGWQTAVSQIGPQFVWWVAAQSVFYHLYNQASYMSLDEISPLSFSIGNTMKRISVIVASIIIFRTPVQPVNALGAAIAILGTFLYSQAKQ 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 387881 389829 - Conep06aG0007900.1 Cone6ag0079 438963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0079 395 PANTHER SOLUTE CARRIER FAMILY 35 95 394 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Cone6ag0079 395 Pfam Triose-phosphate Transporter family 103 391 IPR004853 -
Cone6ag0079 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 239 - -
Cone6ag0079 395 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 103 394 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0309 Cone-Chr15:1431137 Cone6ag0079 Cone-Chr6:387881 2.51E-106 dispersed
Cone6ag0079 Cone-Chr6:387881 Cone9ag0995 Cone-Chr9:5133765 8.35E-80 dispersed
Cone14ag1131 Cone-Chr14:9400025 Cone6ag0079 Cone-Chr6:387881 3.49E-215 wgd
Cone15ag1151 Cone-Chr15:9327612 Cone6ag0079 Cone-Chr6:387881 7.77E-212 wgd
Cone6ag0079 Cone-Chr6:387881 Cone9ag0094 Cone-Chr9:398267 6.53E-08 wgd
Cone6ag0079 Cone-Chr6:387881 Cone9ag1074 Cone-Chr9:6041529 1.69E-191 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0079 K15283 - rcu:8260817 609.757