Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0084 ATGTCAAGCAAAAAATTTGACAGACAACTCCACATACCATTGTTATTGTTGTCACTGTTGTTGATAAAACATGTTAAGGTTTGTCATGGACAAGACGATTCTTTTGGATCTTCTACTCCTTCCGATGGCGACTCAGAGCCGGCAGCCCCACCACCGCAACAGAATAACTGTAATGGAATATTCATGTCGTACACATTCATTTCAAGGGAAAAGCTCTACCCCCACATAAAAAATGTCTCGGCTCAGGCTTGGGGGTTCGAGTCTGAGGCTACAATAGTAAATACAGGGACCAGAGAATTGAAGCAATGGAAGATGTTCATAGGGTTCCAACACCGTGAGTTGTTGGTCTCGGCAAGTGGGGCCGTCACAACGGATGGTGGAGATTTTCCAACCCCAGTTGGAAACGGGACCACCTTGGCTGGGTATCCAATGGTTGATTTAAAGACAGCTATCGACACTGCAGGTGATTTCACACAAATTTCGACCAAAATTGAGTTTAAGGGAACGCAATTTGGACTGTCACCGAAGGCTACACCTATGCCCAGGACGATTCGCCTTGCTAATGACGGCTATAAGTGCCCTGCACCAACTAGACGAGGGAAAAACACAATGATGGTATGTTGTATTGTGGATCCAAAGTACAAGATGAATGATACCAAGAAGACAAAGTATTTCCCAAAGCAAAATGGAGATCTCTCTCTAATGTATGACATTCTTGAATCATATGGAAACAACTATCTAGCCCAAGTAACCATAGACAATAACAACCCATTAGGCCGTCTAGACCGTTGGAATTTAACTTGGGAATGGATGAGAGGAGAGTTCATTCAGACCATGAGAGGAGCTTACACTCGCAAAAAGGACATATCTGAATGTATTTTTGGCCTAGCTGGTCAGTACTTCAAAGACATGGATTTCTCACAAGTAATGAGCTGCGAGAAGAACCCCATAATTGGCGATCTGCCACCCGATCGCGCGAATGACACAAAGATCGGGAAAATACCTTACTGCTGTAGAAATGGTAGTGTCTTGCCAACAGTCATGGACCCGAGCAAAGCAAGGTCCATCTTCCAGTTACAAGTCTTTAAGCTTCCGCCCGATCAAAACCGAACCGCTCTAACCCCACCTCAGAAATGGAAAGTGGATGGTGCTATCAATCCCAATTATAAATGCGGCCCACCACTCCGCGTTGAGCCAACGGTTTTCCCAGACCCCAGTGGGCTCCAAGCTACTTCAAATTCAATTGCCAGCTGGCAGGTCATATGTAACATTACTCGCCCGAAAGAGAGACAAAATAGATGTTGCGTTTCCTACACTGCATACAATAGTGATACTGTGATTCCTTGTCCAACTTGTGCCTGTGGCTGTGAGAACACTGATAACTGTAATCCAGATGCTAAAGCAATGCACCTTCCTCCAGAAGCACTTCTTGTTCCTTTTGAGAACAGAACAGCAAAGGCGAAAGCTTGGGCCGAGCTGAAGAAGAAACCGATCCCAAAAAAGTTACCTTGTTCTGATAATTGCGGAGTTAGTATTAACTGGCACCTTCAGTCTGATTACACGACAGGATGGGCAGCAAAGATGACAATTTTCAACTGGCTAGATGAACCTTTCGTGGATTGGTTTACTGTGGTTGAATTGAAAAATGCAGGTGATGGGTTTGATAAGGTGTATTCCTTTAACGGGACCAAGTTGCCTAAGAACGATATGGCCGTGTTATTTCAAGGATTGAAGTATGATAACTACTTAGTGGCTATTAAAAATGCGAGTAACCCTGAGAAAAGTCCGAAGATTCCGGGAAAGCAGCAGTCTGTGATTTCTTTCAAGAAGAAAAAGCTGCATGGTCTTAACATTAGAAAAGGTGATGGATTCCCTTCAAAGTTGTATTTCAACGGGGAACAGTGTGCTTTGCCTTCAGAATTACCCCTGGAAAATGAAGGCCATAGGACTGGAATCATATCATACTTCACGGTTATAGTTGTTGCATTTTTCACTTTCTTGCTCACAATGGATCTGTTTCATTGGTGA 2028 43.84 MSSKKFDRQLHIPLLLLSLLLIKHVKVCHGQDDSFGSSTPSDGDSEPAAPPPQQNNCNGIFMSYTFISREKLYPHIKNVSAQAWGFESEATIVNTGTRELKQWKMFIGFQHRELLVSASGAVTTDGGDFPTPVGNGTTLAGYPMVDLKTAIDTAGDFTQISTKIEFKGTQFGLSPKATPMPRTIRLANDGYKCPAPTRRGKNTMMVCCIVDPKYKMNDTKKTKYFPKQNGDLSLMYDILESYGNNYLAQVTIDNNNPLGRLDRWNLTWEWMRGEFIQTMRGAYTRKKDISECIFGLAGQYFKDMDFSQVMSCEKNPIIGDLPPDRANDTKIGKIPYCCRNGSVLPTVMDPSKARSIFQLQVFKLPPDQNRTALTPPQKWKVDGAINPNYKCGPPLRVEPTVFPDPSGLQATSNSIASWQVICNITRPKERQNRCCVSYTAYNSDTVIPCPTCACGCENTDNCNPDAKAMHLPPEALLVPFENRTAKAKAWAELKKKPIPKKLPCSDNCGVSINWHLQSDYTTGWAAKMTIFNWLDEPFVDWFTVVELKNAGDGFDKVYSFNGTKLPKNDMAVLFQGLKYDNYLVAIKNASNPEKSPKIPGKQQSVISFKKKKLHGLNIRKGDGFPSKLYFNGEQCALPSELPLENEGHRTGIISYFTVIVVAFFTFLLTMDLFHW 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 406711 408841 - Conep06aG0008400.1 Cone6ag0084 438968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0084 675 MobiDBLite consensus disorder prediction 33 56 - -
Cone6ag0084 675 Pfam COBRA-like protein 246 425 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cone6ag0084 675 PANTHER COBRA-LIKE PROTEIN 7 10 669 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0747 Cone-Chr15:4342724 Cone6ag0084 Cone-Chr6:406711 7.42E-251 dispersed
Cone4ag0122 Cone-Chr4:572363 Cone6ag0084 Cone-Chr6:406711 1.58E-256 dispersed
Cone6ag0084 Cone-Chr6:406711 Cone7ag0118 Cone-Chr7:502059 1.58E-86 dispersed
Cone16ag0165 Cone-Chr16:1013318 Cone6ag0084 Cone-Chr6:406711 0 transposed
Cone14ag1126 Cone-Chr14:9363915 Cone6ag0084 Cone-Chr6:406711 0 wgd
Cone6ag0084 Cone-Chr6:406711 Cone6ag1076 Cone-Chr6:6507109 4.00E-71 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0084 - - - 0.0