Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0089 ATGGTAGGGACGGCGACCAACGGGAAGACCCGGCTATCCTTTTCACCTGTCAAAAATGGCGGCGGCCAAGATTTGGGTCTCAACAGTGCTCCGACGAGCTATGCTGGTTCGGAATGCGGTGGCATTGAGTTCACTAGAGAAATAGACGTTGAAGCTTTGTTGAATGAGAAAGTCAGGAGGAAGGACAAGTTTAACCTTAAGGTCCGTACTTTTGGAGAACTTAAGGAAAAATGTGACAACATGGTGGAATACATTAGAAGGCTTAAGCTATGCATCAAATGGTTCCAAGAGCTTGAGTCCAGCTACTTATCGGAGCAGGAGAAGTTACGGGATAATATGGAGTCGGCTGAGTTGAAGTTCGCTGACATGGAGATTCTATTGAGGAATAAGGATGAAGAATTGAACACGATAATTGCAGAACTTAGAAGGAATTATTCTTCTTTACAAGACAAATTCACAAAAGAAGAATCAGATAAGTTGGCTGCAATTGACTCACTTGGTAAAGAGAAAGAGGCAAGATTAAACATTGAGAGGTCACAGACTTCTCTCTTAGAAGAGCTTGGAAGGTCTCAACGAGAGCTCTTGAGTGCTAATCAAAAGATATCATCACTAAATGAAATGTACAAGCGCTTACAGGACTACATAACCAGTTTACAACAATATAACAGCAAACTTCACACCGAGCTTTCAACAGTTGAAGACGATCTGAAACGCGTAGAGAAAGAGAAAGGCTCCATGGTTGAGGATCTTAGCTTGCTAAGGGGTCAACTTACTCTCTCTAAAGCTTCTCAAGAAGAGGCTACAAAGGAAAAGGATGCATTGGTGAATGAAGTTTCATGTCTAAGAGGGGAACTACAACAAGTGAGAGAAGATCGAGATCGCCATCTGTCACTTGTGCAGTCAGTAACAGCTGAGGTAGTAATGTACAGGGAGTCTACAGAAAAATCCAATGCTGAGTTCGAGGATCTGAGAACAAAAACAAATGAGCTAGAGGCGACTTGTTCATTGCAAAGTAATCAACTAAAGACATTACAGAATCATCTATCGGGGGCAGAAGACAAGCTTCAGGTATCTGATTTATCGGTAGTGGAGACAAGAACGGAATATGAAGAACAAAAGAAGCTTATAATGGAGTTGCAAAATCGCGTTGCAGATGCAGAGAATAAGCTTACAGAAGGCGAGAAGCTAAGGAAAAAATTACACAATACCATTTTGGAACTAAAAGGGAACATACGAGTATTCTGCAGAGTGCGGCCATTGTTGCCTGATGAGGTTTCTAGTTCTGATGGGAGGGTTATCTCCTATCCCACATCAGTAGAGGCTCTTGGAAGAGGAATTGATTTAATGCAAAGTGGCCAAAGACATTCTTTCTCATTTGACAGAGTTTTTATGCCCGACGCAACACAAGAGGATGTCTTTGTAGAAATTTCACAGCTCGTTCAAAGTGCACTAGATGGTTATAAGGTTTGTATTTTTGCCTACGGTCAGACCGGTTCGGGCAAGACTTATACCATGATGGGCAGGCCAGGGCTTCTAGAGGAGAAGGGGCTGATACCGCGTTCGTTAGAACAAATATTTCAGACCAGGCAATCTCTTCAGCCTCAAGGTTGGAAATATGAAATGCAGGTGTCAATGCTGGAAATATATAATGAAACAATTCGAGATTTGCTAGCAACAAATCGGTCATCTTCAGATGTGTCACGATCTGAGCTAGGCAGTGCTGGGAAGCAGTTTGCAATCAAACATGATCCGATGGGTAATACACATGTCTCTGATCTAACGGTTGTGGATGTTCGAAGTGCTAAAGAGGTCTCCTATCTTTTAGATCAGGCTGCTCGTAGCAGGTCTGTTGGTAAAACCCAAATGAACGAGCAATCTTCAAGAAGTCATTTTGTGTTCACACTTCGAATATTTGGTGTTAATGAGAGCACTGAGCAACAAGTACAAGGTGTTCTGAATCTAATCGATCTTGCTGGAAGTGAGCGACTTTCAAAAAGCTTATCAACCGGGGACCGATTGAAAGAAACTCAAGCAATCAATAAAAGTTTATCATCCTTGATCGATGTAATATTTGCCTTGGCAAAAAAGGAGGAGCATGTACCATTTAGAAACTCCAAGCTCACTTATCTTCTTCAGCCATGCCTCGGTGGAGATTCAAAGACCTTGATGTTTGTAAACATCTCTCCGGACCCCACTTCAACGGGCGAGTCACTCTGCTCCCTGCGGTTTGCATCTCGGGTCAATGCTTGTGAGATCGGCACACCCCGGTGTCAGACCAATATGCGGCCCACAGAATCACGATTAAGCTATGCCTGA 2316 42.96 MVGTATNGKTRLSFSPVKNGGGQDLGLNSAPTSYAGSECGGIEFTREIDVEALLNEKVRRKDKFNLKVRTFGELKEKCDNMVEYIRRLKLCIKWFQELESSYLSEQEKLRDNMESAELKFADMEILLRNKDEELNTIIAELRRNYSSLQDKFTKEESDKLAAIDSLGKEKEARLNIERSQTSLLEELGRSQRELLSANQKISSLNEMYKRLQDYITSLQQYNSKLHTELSTVEDDLKRVEKEKGSMVEDLSLLRGQLTLSKASQEEATKEKDALVNEVSCLRGELQQVREDRDRHLSLVQSVTAEVVMYRESTEKSNAEFEDLRTKTNELEATCSLQSNQLKTLQNHLSGAEDKLQVSDLSVVETRTEYEEQKKLIMELQNRVADAENKLTEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDEVSSSDGRVISYPTSVEALGRGIDLMQSGQRHSFSFDRVFMPDATQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGLLEEKGLIPRSLEQIFQTRQSLQPQGWKYEMQVSMLEIYNETIRDLLATNRSSSDVSRSELGSAGKQFAIKHDPMGNTHVSDLTVVDVRSAKEVSYLLDQAARSRSVGKTQMNEQSSRSHFVFTLRIFGVNESTEQQVQGVLNLIDLAGSERLSKSLSTGDRLKETQAINKSLSSLIDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPTSTGESLCSLRFASRVNACEIGTPRCQTNMRPTESRLSYA 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 432907 436689 - Conep06aG0008900.1 Cone6ag0089 438973

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0089 771 PANTHER KINESIN-LIKE PROTEIN KLP-3 311 759 IPR027640 GO:0003777(InterPro)|GO:0007018(InterPro)
Cone6ag0089 771 Coils Coil 106 158 - -
Cone6ag0089 771 Gene3D Kinesin motor domain 356 752 IPR036961 -
Cone6ag0089 771 Coils Coil 362 403 - -
Cone6ag0089 771 ProSiteProfiles Kinesin motor domain profile. 410 750 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone6ag0089 771 Pfam Kinesin motor domain 416 749 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone6ag0089 771 Coils Coil 222 242 - -
Cone6ag0089 771 ProSitePatterns Kinesin motor domain signature. 650 661 IPR019821 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)
Cone6ag0089 771 Coils Coil 264 291 - -
Cone6ag0089 771 SMART kinesin_4 408 758 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone6ag0089 771 FunFam Kinesin-like protein 356 752 - -
Cone6ag0089 771 CDD KISc_C_terminal 408 752 - -
Cone6ag0089 771 PRINTS Kinesin heavy chain signature 486 507 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone6ag0089 771 PRINTS Kinesin heavy chain signature 700 721 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone6ag0089 771 PRINTS Kinesin heavy chain signature 651 669 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone6ag0089 771 PRINTS Kinesin heavy chain signature 620 637 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone6ag0089 771 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 748 IPR027417 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0089 K27887 - - csv:101215636 1136.71
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0089 Cone-Chr6:432907 Cone8ag0202 Cone-Chr8:1062345 7.19E-83 dispersed
Cone1ag0108 Cone-Chr1:593308 Cone6ag0089 Cone-Chr6:432907 5.18E-275 wgd
Cone5ag1761 Cone-Chr5:12539718 Cone6ag0089 Cone-Chr6:432907 1.19E-273 wgd
Cone6ag0089 Cone-Chr6:432907 Cone9ag0105 Cone-Chr9:455957 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g417 Blo03g00584 . Bda07g00337 . . . . . . . Cma01g01154 Cma09g00922 . Car09g00838 . Cpe06g00742 Cpe02g00747 Bhi09g01950 . . . . . . . . . . . . . Cone6ag0089 Cone9ag0105 . . Lsi04g01248 . . . . . . . Bpe11g00523 . . Bma14g00358 . Cmo01g01207 Cmo09g00919 . . . Car16g00566 . . . . . . . . . Cla05g01542 Cam05g1650 Cec05g1655 Cco05g1694 Clacu05g1643 Cmu05g1538 Cre05g1648 . . . Cme04g00801
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006975 1 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 0 1 1 34