Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0092 ATGACAACAGTTTGGTTCTCTCTAAAGAAGTCATTGCATTGCAAATCAGAACCATCGGAAGTTCACGACCCAAAAGCAGGTAACAAGCATTTGAGCTCAATCCTGACCAAAAAGGCCGCGAGGTCAGGCTGCTCGAGGTCTATAGCAAATCTAAAAGATGTCATCCATGGAAGTAAACGACATCTTGAAAAGCCGCATAGTTGCAGCCCGAGATCTATTGGAAGCAGTGAATTTCTCAACCCCATTACACATGAAGTCATTCTAAGCAACTCTAGGTGTGAACTCAAAGTCACTAGCTTACTCGGCGGCTTACAAGAAGGCGGAGCCGGTTATGGTGGCAGTTCGGCTTTTGAGGGAATGTTAAGGCCCGGAACCCTGGGGCCTGGGCTGAACCCAGCAATGGACTATAACAACCCCTCTTCAACCCCCTCAAGGAGGTTCCCTTTTCTAATGTCAGATAAAGAAGGGTCTAATACCACTGCTACTAGTAGGCTTGGTGGTTCTGCTAAGTACAATAGTTCAAGCAATAAGGCCTCTCTTGAAACAGAAGCTAATAATTGCATTAATGGAGTTGGATCATCATCTTCTTTTTCAATCACTTGTCACAAATGTGGAGAGCAGTTTAGCAAATGGGAACTTGCAGAAACTCACCATCTCTCCAAACATGCTGTTACTGAACTTGTGGAAGGAGATTCTTCGAGGAAAATAGTGGAAATAATATGCCGGACGAGCTGGTTAAAGTCCGATAATAATTGCGGGCGAATAGAGAGGGTGTTAAAAGTACACAACATGCAAAGAACTCTAGCTAGATTTGAGGAGTACAGGGAGATGGTTAAAAGCAAAGCGAGCAAGCTTCCAAAGAAACACCCTCGTTGCATCGCCGACGGGAATGAGCTGTTGCGGTTTTACGGCACGACTGTCAGCTGCTCATTGGGCCTAAATGGGTCAGCCAGTGTTTGCATATCAGAAAAGTGTTGTGTTTGTCGGATCATTCGAAACGGTTTTTCGGTAAAAAATGAGTTGAAGGAAGGGGTAGGGGTTTTTACGACCTCTACTAGCGGAAGAGCATTTGAATCGATCGAAGTGGTTGAAGGGGATTCTTGTTCTGCAAGAAAGGCTTTGATAGTTTGTAGAGTGATTGCTGGAAGAGTTCATAGACCTTTGGAGAATATACAGGAAATGGTTGGCCAAGTTGGGTTTGATTCATTGGCTGGTAAAGTTGGTCTTTATTCCAATATTGAGGAGCTTTATTTGCTCAATCCAAGAGCTATGCTTCCCTGCTTTGTGGTCATTTGCAAATCCTGA 1305 44.29 MTTVWFSLKKSLHCKSEPSEVHDPKAGNKHLSSILTKKAARSGCSRSIANLKDVIHGSKRHLEKPHSCSPRSIGSSEFLNPITHEVILSNSRCELKVTSLLGGLQEGGAGYGGSSAFEGMLRPGTLGPGLNPAMDYNNPSSTPSRRFPFLMSDKEGSNTTATSRLGGSAKYNSSSNKASLETEANNCINGVGSSSSFSITCHKCGEQFSKWELAETHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSDNNCGRIERVLKVHNMQRTLARFEEYREMVKSKASKLPKKHPRCIADGNELLRFYGTTVSCSLGLNGSASVCISEKCCVCRIIRNGFSVKNELKEGVGVFTTSTSGRAFESIEVVEGDSCSARKALIVCRVIAGRVHRPLENIQEMVGQVGFDSLAGKVGLYSNIEELYLLNPRAMLPCFVVICKS 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 446661 448147 + Conep06aG0009200.1 Cone6ag0092 438976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0092 434 MobiDBLite consensus disorder prediction 152 172 - -
Cone6ag0092 434 ProSitePatterns Zinc finger C2H2 type domain signature. 201 222 IPR013087 -
Cone6ag0092 434 FunFam C2H2-like zinc finger protein 223 433 - -
Cone6ag0092 434 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 433 - -
Cone6ag0092 434 Gene3D - 223 434 - -
Cone6ag0092 434 SUPERFAMILY ADP-ribosylation 224 433 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0092 Cone-Chr6:446661 Cone7ag1881 Cone-Chr7:12127236 2.84E-66 dispersed
Cone14ag1118 Cone-Chr14:9313725 Cone6ag0092 Cone-Chr6:446661 2.85E-180 wgd
Cone15ag1134 Cone-Chr15:9227314 Cone6ag0092 Cone-Chr6:446661 7.32E-97 wgd
Cone6ag0092 Cone-Chr6:446661 Cone9ag0108 Cone-Chr9:469629 7.54E-299 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46256 PF13639 zf-RING_2 1.30E-11 CL0229 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0092 - - - 0.0