Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0094 ATGGACTCGCACCAGATTCTCGGATTCAGCGTTACTGGTGCAGAAGTTACATACAACACATCTTCATATCCCACCACTCCCTCTATACCAAATCATTTACTCGGATCGTTGAAATTCAACACTGGAAACTCACCCAATTCGCCCATTTTATCTCCCTTCGATTCAGATATTCTTACAACGCTAAGCGACAGTCAGGAACAGCTTATCTCCACGGAGAATCTCTCCAGATTCAGCCCTTCTTGTAACTCCTCGATCGAATCCAACAGCTACTTACTACGGCCTTTGGCTGATAACTCCCAAGTCAACAACCCCCAGCTCTACTCAGGTGGGGCCGGTTGTCTGGATAATGCAGGCCAGAGTCAGTCGCAGAACATAAGTCTCGCATTGCAGGAATTGGAGACAGCACTTATGGGGCCAGATGGTGAGGAAGAAGCGATGAGCAAACCAAAAACTTCTTTTGGAAAAAGTAGCCGGCAACAACAACAAATACTGGGCCAGGGCTCGAGGATGTGGAACCCCCACAACATTCAACCTCAGCCGTCCTTTGTTTATAGGCATAGGCAGCAATCCGGTAAAGAAGCGGTTCATATCGAGAAACGTCAAAAATCGATCTCTGAGGCAGCACCATTACAGGCCGGATTTCCACCAAGCAATAATCTAAAGCAATTGCTTATAGCTTGTGCTAAATCTCTCTCAGAAAACAACATGGAAGAATTCGAAAAGCTGGTTGAAAAGGCTAGAGGGGCTGTATCAATTACTGGAGAACCGATCCAACGGCTAGGAGCTTACATGGTGGAAGGGTTGGTTGGTAGGAAAGAGGCATCAGGCACGAACATCTACCGTGCCCTGAGGTGTAGAGAGCCAGAAAGCTCAGACTTGCTCTCATACATGCACATCTTATACGAAATCTGCCCATACTTGAAATTCGGTTACATGGCAGCTAATGGTGCTATTGCTGAGGCATGCAAAAATGAGGACCGAATCCACATAGTAGATTTCCGAATTGCTCAAGGGACACAATGGACCACTCTCCTTCAAGCACTTGCTGCCAGACCCAGAGGGGCCCCACATGTGAGGATTACGGGGATTGATGATCACGATTCGAAATATGCACGGGGTGATGGATTAGAGCTAGTAGGAAAGCGTTTGGCTGCGATTTCAGAAAAATTCAATATCCCGGTAGAGTTTCATGGGGTCCCGGTTTTTGCCCCAGATGTCACTTCCGGAATGCTTGATGTCCGGCCCGGAGAAGCTTTGGCTGTTAACTTTCCTCTCCAATTACATCACACACCGGACGAGAGTGTAGACGTGAATAATCCAAGAGATGGGCTTCTAAGAATGGTGAAGTCTTTATCGCCTAAAGTGATCACTTTAGTCGAGCAAGAATCGAATACAAATACGACCCCTTTCTTCTACAGGTTTGTGGAAACTCTAGAGTACTATTTGGCAATGTTCGAGTCGATTGACGTGACTCTTCCGAGGAACAGCAAGAAGAGGATTAATGTGGAGCAGCATTGTCTGGCTAGGGACATCGTTAATGTTATAGCTTGTGAGGGGAAAGAGAGGGTAGAGAGGCACGAGCTTTTCGGGAAGTGGAAGTCTAGGTTGACTATGGCTGGGTTCAGACAGTATCCATTGAGTTCTTACGTGAATTCGGTTATAAGCAGTCTGTTGAGGTGTTACTCGGAACATTACACGCTTGTCGAGAAGGATGGGGCTATGCTATTGGGTTGGAAGGATAGGAATCTGATTTCTGCTTCAGCCTGGAACTAA 1773 46.76 MDSHQILGFSVTGAEVTYNTSSYPTTPSIPNHLLGSLKFNTGNSPNSPILSPFDSDILTTLSDSQEQLISTENLSRFSPSCNSSIESNSYLLRPLADNSQVNNPQLYSGGAGCLDNAGQSQSQNISLALQELETALMGPDGEEEAMSKPKTSFGKSSRQQQQILGQGSRMWNPHNIQPQPSFVYRHRQQSGKEAVHIEKRQKSISEAAPLQAGFPPSNNLKQLLIACAKSLSENNMEEFEKLVEKARGAVSITGEPIQRLGAYMVEGLVGRKEASGTNIYRALRCREPESSDLLSYMHILYEICPYLKFGYMAANGAIAEACKNEDRIHIVDFRIAQGTQWTTLLQALAARPRGAPHVRITGIDDHDSKYARGDGLELVGKRLAAISEKFNIPVEFHGVPVFAPDVTSGMLDVRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLSPKVITLVEQESNTNTTPFFYRFVETLEYYLAMFESIDVTLPRNSKKRINVEQHCLARDIVNVIACEGKERVERHELFGKWKSRLTMAGFRQYPLSSYVNSVISSLLRCYSEHYTLVEKDGAMLLGWKDRNLISASAWN 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 455288 458065 + Conep06aG0009400.1 Cone6ag0094 438978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0094 590 MobiDBLite consensus disorder prediction 140 162 - -
Cone6ag0094 590 Pfam GRAS domain family 220 589 IPR005202 -
Cone6ag0094 590 ProSiteProfiles GRAS family profile. 211 590 IPR005202 -
Cone6ag0094 590 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 181 589 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag1294 Cone-Chr3:31806914 Cone6ag0094 Cone-Chr6:455288 4.52E-167 dispersed
Cone4ag1449 Cone-Chr4:11499843 Cone6ag0094 Cone-Chr6:455288 5.41E-137 dispersed
Cone5ag1816 Cone-Chr5:12832470 Cone6ag0094 Cone-Chr6:455288 4.71E-130 dispersed
Cone6ag0094 Cone-Chr6:455288 Cone7ag1483 Cone-Chr7:10404947 3.59E-118 dispersed
Cone6ag0094 Cone-Chr6:455288 Cone9ag0110 Cone-Chr9:478390 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46257 PF01253 SUI1 4.10E-24 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0094 K27748 - mdm:103429461 813.142