Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0119 ATGATGGAAATGAATCTAGTGAAGTTAGTATCTATACTTCTTTCTGTTCTTTTGTCTGTCAGTTTAGGATCCTTTGCCTCATTCACTCCCACTGATAACTACTTAGTTTCTTGTGGTTCTTCACAAAATGTCACCTTCCAAGGTCGAACTTTCGTTCCCGATTCAGACTATTTTTCTCTCAAAAAAGGAAGTTCTAGTGTAGCCAGTTCCAACACTAGTTTTCCATCTCCCATTTACCAATTTGCTCGTATTTTCACTGGCTTAGCCTCTTACAAATTCGATATTCAGAGTCCAGGACGGCATTGGGTTCGCCTCTATTTCTACCCTTTTCCAAATTCAGGTCAAAATTTGACCTCTTCTTCAATAACAGTAGTCACCGATCATTTTGTGCTCTTGAACAACTTCACTTTCAAGAACTACAATGGTTCTTACATGTTCAAGGAGTATGCACTCAATATCACTTCTGATTCTTTGACCCTTACATTCATCCCTTCAAATAATTCAGTCTCATTCATTAATGCAATTGAAGTCGTCTCTATGCCCGAGGAAGTTCTTCCTGACCAAGCATTGGCTTTGAACCCATCTGCCCCTTTTGACGGTCTTTCGCTACTTGCTCTAGAAACTGTTTACCGACTAAATATGGGCGGCCCACTCATCAGCCCACGAAACGACACCCTTGGAAGAACTTGGGAGAATGATTTTAAGTACCTCCATGTGAACAGTTCTGCAGTGAATGTTTCAGTCAACCCAGCAAATATTAAATATCCTGCAGCTGTTACACCAGAAACTGCACCAAATTGGGTATATGCAACTGCTGATGCCATGGGAGATGCAAATGTACAGAATGTGAACTTCAATTTGACATGGGTTTTCTCTGTCGATCCAAATTTCTATTACTTTGTTCGAGTACATTTCTGTGATATTGTGAGCAAATCTCTAAACACCCTAGTTTTCAATCTTTATATTAATTTGGATAAGGCTCTTGGAAGTTTCGACCTTTCATCTTTGACTGGTGATTTGGGTGTGCCTTATTATAAAGACTTTGTTTCCAACTTGGCAAATTCGGATACTTTGACAGTTAGTGTGGGGCCCGATACAATGGCTGACATCACAAATGCGACTTTAAACGGATTGGAGATTATGAAGATCAGCAATCATGCAGGGAGTTTGGATGGTGTATCATCAGTTGATGGTCTTCTTCCTCAAGAACTTTCGAAGAAGAGTAAGATGGCAATAATAATCGGTTCTGTCATTGGAGCTATAGTTGCTGTTTTATTAATCGGTCTGTGTTGTTACTGCTTGATTGGCTACAAGGTGAAGACCACAAGCCAAGGGAATTCATGGCTGCCTTTGCCCTTACATGGGAACTCTCTGACCATGACAAAAATGTCAACTACTTCCCAGAAGAGTGGTACAGCAAGCTGTATATCATTGGCTTCCTCCAATCTCGGCCGGGTATTCACATTTCAAGAAATCATTGATGCTACAAACAAGTTTGATGAAAATCTACTTCTTGGGGTTGGTGGATTTGGCCGGGTTTATAAGGGAACCCTTGAAGATGGGACAAAAGTAGCTGTTAAAAGAGGAAACCCAAGATCCGAACAGGGTCTTGCTGAATTCCGAACAGAAATCGAAATGCTATCCAAGCTCAGACATCGCCACCTTGTTTCTCTTATTGGCTACTGTGATGAACGATCAGAGATGATTCTCGTCTATGAATATATGGCAAATGGGCCTCTTAGGAGTCACTTGTACGGAACAGATTTGCCACCTCTGTCATGGAAGCAAAGAATCGAAATTTGCATTGGATCTGCTCGTGGGCTTCATTATCTTCATACGGGTGCATCTCAAAGCATTATTCACCGAGATGTGAAGACAACCAATATTCTCTTGGATGAGAATTTTGTAGCAAAAGTTGCTGATTTCGGTCTTTCTAAAACGGGTCCATCTCTTGATCAGACTCATGTCAGTACTGCTGTTAAGGGAAGTTTTGGTTACCTTGACCCGGAATATTTCCGAAGGCAACAGCTTACTGAGAAATCGGATGTATATTCATTTGGAGTTGTTCTAATGGAAGTTCTATGCACAAGACCGGCTTTAAACCCTGTTCTTCCAAGGGAGCAAGTGAATATAGCAGAATGGGCCATGGCATGGCAAAAGAAGGGAATGTTGGACCAAATCATGGATCCGAATATAGTGGGGAAGGTTAATCCATCTTCTCTTAAGAAATTTGGAGAGACAGCCGAGAAGTGTTTAGCTGAGCATGGGGTTGATAGGCCTTCAATGGGTGATGTGTTATGGAATCTGGAATATGCTCTTCAGCTTGAGGAAACTTCTTCTCAACTATTGGAGCCTGAAGGTGGTAACAGCACAAATCATATTCCAACCATCCAATTGGCTACCTTAGAGCCGTTTGATAATAGTGTGAGCATGATTGATGGGAGAAACTCTGGTACTGATGATGATACAGAAGATGCCGCAACAAGTGCGGTGTTTTCTCAGCTAGTGAATCCAAGGGGAAGATGA 2526 41.53 MMEMNLVKLVSILLSVLLSVSLGSFASFTPTDNYLVSCGSSQNVTFQGRTFVPDSDYFSLKKGSSSVASSNTSFPSPIYQFARIFTGLASYKFDIQSPGRHWVRLYFYPFPNSGQNLTSSSITVVTDHFVLLNNFTFKNYNGSYMFKEYALNITSDSLTLTFIPSNNSVSFINAIEVVSMPEEVLPDQALALNPSAPFDGLSLLALETVYRLNMGGPLISPRNDTLGRTWENDFKYLHVNSSAVNVSVNPANIKYPAAVTPETAPNWVYATADAMGDANVQNVNFNLTWVFSVDPNFYYFVRVHFCDIVSKSLNTLVFNLYINLDKALGSFDLSSLTGDLGVPYYKDFVSNLANSDTLTVSVGPDTMADITNATLNGLEIMKISNHAGSLDGVSSVDGLLPQELSKKSKMAIIIGSVIGAIVAVLLIGLCCYCLIGYKVKTTSQGNSWLPLPLHGNSLTMTKMSTTSQKSGTASCISLASSNLGRVFTFQEIIDATNKFDENLLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRIEICIGSARGLHYLHTGASQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMAWQKKGMLDQIMDPNIVGKVNPSSLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSQLLEPEGGNSTNHIPTIQLATLEPFDNSVSMIDGRNSGTDDDTEDAATSAVFSQLVNPRGR 841
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 572346 575753 - Conep06aG0011900.1 Cone6ag0119 439003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0119 841 FunFam Receptor-like protein kinase FERONIA 575 786 - -
Cone6ag0119 841 Gene3D Phosphorylase Kinase; domain 1 458 574 - -
Cone6ag0119 841 Pfam Protein tyrosine and serine/threonine kinase 505 765 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag0119 841 PANTHER OS07G0166700 PROTEIN 487 776 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cone6ag0119 841 SMART serkin_6 499 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0119 841 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524(InterPro)
Cone6ag0119 841 FunFam Receptor-like protein kinase FERONIA 205 385 - -
Cone6ag0119 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag0119 841 FunFam Putative receptor-like protein kinase 33 181 - -
Cone6ag0119 841 Gene3D - 33 181 - -
Cone6ag0119 841 Gene3D - 204 385 - -
Cone6ag0119 841 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0119 841 Gene3D Transferase(Phosphotransferase) domain 1 575 787 - -
Cone6ag0119 841 CDD STKc_IRAK 505 770 - -
Cone6ag0119 841 SUPERFAMILY Protein kinase-like (PK-like) 478 770 IPR011009 -
Cone6ag0119 841 FunFam receptor-like protein kinase FERONIA 461 574 - -
Cone6ag0119 841 Pfam Malectin-like domain 36 383 IPR024788 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0055 Cone-Chr13:346670 Cone6ag0119 Cone-Chr6:572346 8.25E-110 dispersed
Cone1ag0305 Cone-Chr1:2291079 Cone6ag0119 Cone-Chr6:572346 4.34E-213 dispersed
Cone1ag0678 Cone-Chr1:6360381 Cone6ag0119 Cone-Chr6:572346 3.65E-283 dispersed
Cone1ag1308 Cone-Chr1:56331481 Cone6ag0119 Cone-Chr6:572346 7.43E-109 dispersed
Cone3ag0691 Cone-Chr3:3533339 Cone6ag0119 Cone-Chr6:572346 3.84E-214 dispersed
Cone5ag0290 Cone-Chr5:1226688 Cone6ag0119 Cone-Chr6:572346 9.68E-271 dispersed
Cone5ag0310 Cone-Chr5:1304876 Cone6ag0119 Cone-Chr6:572346 7.51E-227 dispersed
Cone5ag1186 Cone-Chr5:5339864 Cone6ag0119 Cone-Chr6:572346 1.00E-282 dispersed
Cone6ag0119 Cone-Chr6:572346 Cone8ag1216 Cone-Chr8:10306930 6.64E-273 dispersed
Cone6ag0119 Cone-Chr6:572346 Cone9ag0144 Cone-Chr9:624888 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82903 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0119 - - - 0.0