Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag0146 | ATGGGCTGCATTTGTTGCAAGCCCTATGCTATAGAAGATAGCAAGGAAAGCAGCCCAAGGGCAAGAGCCTCTTCGACCAAGGCCTCATTGGACCTACGGGTCTCAAGACTCACTTCCTTGAGGAGAGAGGAAGCAGTTCATCAGCCTAAAGATCGGTGTGAAACTAATGAAGGGAGAGGAGCCATTTTGATCAATAAGCAAGTGAACAGGTCTATACGTTCACAAGGCGGTGACAATTTTGAAAGGAAGAGGGAAAAGATGGAGTATCATGCACTTGCTCATTATCCTGGGGCAGGTAGTATTCCTAAGGCTACAGAAGGTGAACAAATTGCTGCAGGGTGGCCCCCCTGGCTTGCTTCCGTGGCTGGAGAAGCTATCAAGGGGTGGTTACCTCGCCGAGCTGATTCTTTTGAGCGGCTTGATAAAATTGGGCAGGGAACTTACAGTAATGTCTATAGGGCTCGAGATCTTGATCAGAAGAAAATCGTTGCTTTGAAGAAAGTGAGGTTTGACAACCTCGAGCCAGAGAGTGTTCGTTTTATGGCAAGAGAAATTCACATTTTGCGCCGGCTTAACCATCCAAATGTAATAAAGTTGGAAGGTCTAGTCACGTCAAGGATGTCTTGCAGCTTGTACCTTGTTTTTGAGTACATGGAACATGACTTAGCCGGGCTTGCTTCTCACCCTGGTCCAAAATTTACAGAAGCACAGGTCAAATGTTACATGCAACAACTGTTACGTGGATTGGAGCATTGTCACAGCTGTGGTGTTTTGCACCGAGACATTAAGGGTTCGAACCTTCTAATTGATAACAATGGCATATTGAAAATTGCGGACTTTGGTCTGGCGAGTTTCTTTGACCCCAATCAAAGTCAACCACTGACCAGCCGTGTTGTAACCCTTTGGTACCGACCTCCAGAGCTTTTACTCGGAGCCACTTACTATGGGACAGCTGTTGACCTATGGAGTGCGGGTTGTATACTTGCTGAGTTGTATGCCGGAAAGCCTATCATGCCCGGAAGAACCGAGGTGGAGCAGTTGCATAAAATATTCAAACTTTGCGGGTCCCCTTCTGAGGAATATTGGAAAAAGTCAAAGCTGCCTCATGCAACTATATTTAAGCCACGACAACCCTATAGACGTCGAGTTGCTGAAACGTTTAAGGATTTTCCTGCGCCTGCCTTAGCTCTTATGGAGATTCTTCTTTCCATTGATCCTGCTGATCGTGGATCTGCAACTTCTGCTCTTAAGAATGAATTTTTTACAACAAAGCCATTTCCTTGTGATCCTTTGAGCCTGCCAAAGTATCCTCCCAGCAAAGAGTTTGATGCAAAACTGCGTGATGAAGAATCTAGAAGACAAGGAGTGGATGGAAACGAGGGCCAGAGACTTGACCTTGAAAAGAGAGGAACACGAGAATCTCGAGCAGTCCCTGCCCCTGATGCCAATGCTGAATTAGTATTGTCAATGCAGAAAAGACAAGGTCAGTCTAATTCCAAAAGCCGGAGTGAGAAGTTTAACCCTCATCCCGAAGAAATTGCTTCTGGATTTCCAATGGATCCACCAAGACCTTCCCAAGCTGTAGAAGCAAGTGTAGAACCTCATGAGCATCATCCGAAGAGAGCCTCCCATTCCGGCCCACTTGCTCAACGAGCTGCCTGGATGAAGCCCAGTAAGAACCCAGATGATGCTCCCAAGATCTCAACTGGGCCCACAGTGTCAACAACAATGTCAGAGTTAGAGGCAGCAAGGAGAAGCATTTTGGCTGATGATCACAGAGAAAGGTCCAGTTCTTCACAAGCAGAATCTAAAAAAATTATAAGTAGATTCACTGGATCTTTCAAGGAATCCTCGGAACTACAGGACCAAAGACAGCTCATGCAGGGTGTTCCAGGTTCTAATAAGAAAGATGGGAGAATCACTAGCAAAGATCCAAGTCTTATTGGTTATGGATCGAAGGGTCACAAAATTCACTACTCGGGCCCCCTGTTGGTTCCATCGAGCAACATGGACCAGGTGTTGAAAGATCATGACCGTCAGATCCAAGAAGCTGTAAGACGAGCTCGCCTCGACAAGGCTAAGGTCAGGAAGATTCAACTTGAAGAGAATCAAATCTCGTCCAACTCATTGATTGTTTCTGGTCGTTGA | 2148 | 46.09 | MGCICCKPYAIEDSKESSPRARASSTKASLDLRVSRLTSLRREEAVHQPKDRCETNEGRGAILINKQVNRSIRSQGGDNFERKREKMEYHALAHYPGAGSIPKATEGEQIAAGWPPWLASVAGEAIKGWLPRRADSFERLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLNHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGPKFTEAQVKCYMQQLLRGLEHCHSCGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPNQSQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSAGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPRQPYRRRVAETFKDFPAPALALMEILLSIDPADRGSATSALKNEFFTTKPFPCDPLSLPKYPPSKEFDAKLRDEESRRQGVDGNEGQRLDLEKRGTRESRAVPAPDANAELVLSMQKRQGQSNSKSRSEKFNPHPEEIASGFPMDPPRPSQAVEASVEPHEHHPKRASHSGPLAQRAAWMKPSKNPDDAPKISTGPTVSTTMSELEAARRSILADDHRERSSSSQAESKKIISRFTGSFKESSELQDQRQLMQGVPGSNKKDGRITSKDPSLIGYGSKGHKIHYSGPLLVPSSNMDQVLKDHDRQIQEAVRRARLDKAKVRKIQLEENQISSNSLIVSGR | 715 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 740829 | 744179 | + | Conep06aG0014700.1 | Cone6ag0146 | 439030 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag0146 | 715 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 257 | 269 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone6ag0146 | 715 | Pfam | Protein kinase domain | 137 | 421 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone6ag0146 | 715 | MobiDBLite | consensus disorder prediction | 431 | 579 | - | - | |
Cone6ag0146 | 715 | ProSitePatterns | Protein kinases ATP-binding region signature. | 143 | 166 | IPR017441 | GO:0005524(InterPro) | |
Cone6ag0146 | 715 | FunFam | probable serine/threonine-protein kinase At1g54610 | 124 | 219 | - | - | |
Cone6ag0146 | 715 | SUPERFAMILY | Protein kinase-like (PK-like) | 131 | 428 | IPR011009 | - | |
Cone6ag0146 | 715 | CDD | STKc_CDK9_like | 137 | 421 | - | - | |
Cone6ag0146 | 715 | PANTHER | CELL DIVISION PROTEIN KINASE | 136 | 421 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Cone6ag0146 | 715 | MobiDBLite | consensus disorder prediction | 615 | 652 | - | - | |
Cone6ag0146 | 715 | Gene3D | Phosphorylase Kinase; domain 1 | 124 | 219 | - | - | |
Cone6ag0146 | 715 | Gene3D | Transferase(Phosphotransferase) domain 1 | 220 | 460 | - | - | |
Cone6ag0146 | 715 | MobiDBLite | consensus disorder prediction | 615 | 630 | - | - | |
Cone6ag0146 | 715 | MobiDBLite | consensus disorder prediction | 565 | 579 | - | - | |
Cone6ag0146 | 715 | FunFam | probable serine/threonine-protein kinase At1g54610 | 220 | 461 | - | - | |
Cone6ag0146 | 715 | SMART | serkin_6 | 137 | 421 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone6ag0146 | 715 | ProSiteProfiles | Protein kinase domain profile. | 137 | 421 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone6ag0146 | 715 | MobiDBLite | consensus disorder prediction | 489 | 503 | - | - | |
Cone6ag0146 | 715 | MobiDBLite | consensus disorder prediction | 440 | 475 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag0687 | Cone-Chr13:6806189 | Cone6ag0146 | Cone-Chr6:740829 | 1.20E-236 | dispersed | |
Cone3ag1420 | Cone-Chr3:32999063 | Cone6ag0146 | Cone-Chr6:740829 | 1.92E-191 | dispersed | |
Cone6ag0146 | Cone-Chr6:740829 | Cone7ag0178 | Cone-Chr7:747060 | 3.18E-211 | dispersed | |
Cone12ag1466 | Cone-Chr12:10498908 | Cone6ag0146 | Cone-Chr6:740829 | 1.85E-205 | wgd | |
Cone14ag1063 | Cone-Chr14:8962512 | Cone6ag0146 | Cone-Chr6:740829 | 0 | wgd | |
Cone3ag1494 | Cone-Chr3:33561670 | Cone6ag0146 | Cone-Chr6:740829 | 1.56E-41 | wgd | |
Cone6ag0146 | Cone-Chr6:740829 | Cone8ag1512 | Cone-Chr8:11426498 | 1.01E-198 | wgd | |
Cone6ag0146 | Cone-Chr6:740829 | Cone9ag0171 | Cone-Chr9:760275 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82904 | PF05553 | DUF761 | 5.40E-15 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag0146 | - | - | - | 0.0 |