Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0146 ATGGGCTGCATTTGTTGCAAGCCCTATGCTATAGAAGATAGCAAGGAAAGCAGCCCAAGGGCAAGAGCCTCTTCGACCAAGGCCTCATTGGACCTACGGGTCTCAAGACTCACTTCCTTGAGGAGAGAGGAAGCAGTTCATCAGCCTAAAGATCGGTGTGAAACTAATGAAGGGAGAGGAGCCATTTTGATCAATAAGCAAGTGAACAGGTCTATACGTTCACAAGGCGGTGACAATTTTGAAAGGAAGAGGGAAAAGATGGAGTATCATGCACTTGCTCATTATCCTGGGGCAGGTAGTATTCCTAAGGCTACAGAAGGTGAACAAATTGCTGCAGGGTGGCCCCCCTGGCTTGCTTCCGTGGCTGGAGAAGCTATCAAGGGGTGGTTACCTCGCCGAGCTGATTCTTTTGAGCGGCTTGATAAAATTGGGCAGGGAACTTACAGTAATGTCTATAGGGCTCGAGATCTTGATCAGAAGAAAATCGTTGCTTTGAAGAAAGTGAGGTTTGACAACCTCGAGCCAGAGAGTGTTCGTTTTATGGCAAGAGAAATTCACATTTTGCGCCGGCTTAACCATCCAAATGTAATAAAGTTGGAAGGTCTAGTCACGTCAAGGATGTCTTGCAGCTTGTACCTTGTTTTTGAGTACATGGAACATGACTTAGCCGGGCTTGCTTCTCACCCTGGTCCAAAATTTACAGAAGCACAGGTCAAATGTTACATGCAACAACTGTTACGTGGATTGGAGCATTGTCACAGCTGTGGTGTTTTGCACCGAGACATTAAGGGTTCGAACCTTCTAATTGATAACAATGGCATATTGAAAATTGCGGACTTTGGTCTGGCGAGTTTCTTTGACCCCAATCAAAGTCAACCACTGACCAGCCGTGTTGTAACCCTTTGGTACCGACCTCCAGAGCTTTTACTCGGAGCCACTTACTATGGGACAGCTGTTGACCTATGGAGTGCGGGTTGTATACTTGCTGAGTTGTATGCCGGAAAGCCTATCATGCCCGGAAGAACCGAGGTGGAGCAGTTGCATAAAATATTCAAACTTTGCGGGTCCCCTTCTGAGGAATATTGGAAAAAGTCAAAGCTGCCTCATGCAACTATATTTAAGCCACGACAACCCTATAGACGTCGAGTTGCTGAAACGTTTAAGGATTTTCCTGCGCCTGCCTTAGCTCTTATGGAGATTCTTCTTTCCATTGATCCTGCTGATCGTGGATCTGCAACTTCTGCTCTTAAGAATGAATTTTTTACAACAAAGCCATTTCCTTGTGATCCTTTGAGCCTGCCAAAGTATCCTCCCAGCAAAGAGTTTGATGCAAAACTGCGTGATGAAGAATCTAGAAGACAAGGAGTGGATGGAAACGAGGGCCAGAGACTTGACCTTGAAAAGAGAGGAACACGAGAATCTCGAGCAGTCCCTGCCCCTGATGCCAATGCTGAATTAGTATTGTCAATGCAGAAAAGACAAGGTCAGTCTAATTCCAAAAGCCGGAGTGAGAAGTTTAACCCTCATCCCGAAGAAATTGCTTCTGGATTTCCAATGGATCCACCAAGACCTTCCCAAGCTGTAGAAGCAAGTGTAGAACCTCATGAGCATCATCCGAAGAGAGCCTCCCATTCCGGCCCACTTGCTCAACGAGCTGCCTGGATGAAGCCCAGTAAGAACCCAGATGATGCTCCCAAGATCTCAACTGGGCCCACAGTGTCAACAACAATGTCAGAGTTAGAGGCAGCAAGGAGAAGCATTTTGGCTGATGATCACAGAGAAAGGTCCAGTTCTTCACAAGCAGAATCTAAAAAAATTATAAGTAGATTCACTGGATCTTTCAAGGAATCCTCGGAACTACAGGACCAAAGACAGCTCATGCAGGGTGTTCCAGGTTCTAATAAGAAAGATGGGAGAATCACTAGCAAAGATCCAAGTCTTATTGGTTATGGATCGAAGGGTCACAAAATTCACTACTCGGGCCCCCTGTTGGTTCCATCGAGCAACATGGACCAGGTGTTGAAAGATCATGACCGTCAGATCCAAGAAGCTGTAAGACGAGCTCGCCTCGACAAGGCTAAGGTCAGGAAGATTCAACTTGAAGAGAATCAAATCTCGTCCAACTCATTGATTGTTTCTGGTCGTTGA 2148 46.09 MGCICCKPYAIEDSKESSPRARASSTKASLDLRVSRLTSLRREEAVHQPKDRCETNEGRGAILINKQVNRSIRSQGGDNFERKREKMEYHALAHYPGAGSIPKATEGEQIAAGWPPWLASVAGEAIKGWLPRRADSFERLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLNHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGPKFTEAQVKCYMQQLLRGLEHCHSCGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPNQSQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSAGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPRQPYRRRVAETFKDFPAPALALMEILLSIDPADRGSATSALKNEFFTTKPFPCDPLSLPKYPPSKEFDAKLRDEESRRQGVDGNEGQRLDLEKRGTRESRAVPAPDANAELVLSMQKRQGQSNSKSRSEKFNPHPEEIASGFPMDPPRPSQAVEASVEPHEHHPKRASHSGPLAQRAAWMKPSKNPDDAPKISTGPTVSTTMSELEAARRSILADDHRERSSSSQAESKKIISRFTGSFKESSELQDQRQLMQGVPGSNKKDGRITSKDPSLIGYGSKGHKIHYSGPLLVPSSNMDQVLKDHDRQIQEAVRRARLDKAKVRKIQLEENQISSNSLIVSGR 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 740829 744179 + Conep06aG0014700.1 Cone6ag0146 439030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0146 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag0146 715 Pfam Protein kinase domain 137 421 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0146 715 MobiDBLite consensus disorder prediction 431 579 - -
Cone6ag0146 715 ProSitePatterns Protein kinases ATP-binding region signature. 143 166 IPR017441 GO:0005524(InterPro)
Cone6ag0146 715 FunFam probable serine/threonine-protein kinase At1g54610 124 219 - -
Cone6ag0146 715 SUPERFAMILY Protein kinase-like (PK-like) 131 428 IPR011009 -
Cone6ag0146 715 CDD STKc_CDK9_like 137 421 - -
Cone6ag0146 715 PANTHER CELL DIVISION PROTEIN KINASE 136 421 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cone6ag0146 715 MobiDBLite consensus disorder prediction 615 652 - -
Cone6ag0146 715 Gene3D Phosphorylase Kinase; domain 1 124 219 - -
Cone6ag0146 715 Gene3D Transferase(Phosphotransferase) domain 1 220 460 - -
Cone6ag0146 715 MobiDBLite consensus disorder prediction 615 630 - -
Cone6ag0146 715 MobiDBLite consensus disorder prediction 565 579 - -
Cone6ag0146 715 FunFam probable serine/threonine-protein kinase At1g54610 220 461 - -
Cone6ag0146 715 SMART serkin_6 137 421 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0146 715 ProSiteProfiles Protein kinase domain profile. 137 421 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0146 715 MobiDBLite consensus disorder prediction 489 503 - -
Cone6ag0146 715 MobiDBLite consensus disorder prediction 440 475 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0687 Cone-Chr13:6806189 Cone6ag0146 Cone-Chr6:740829 1.20E-236 dispersed
Cone3ag1420 Cone-Chr3:32999063 Cone6ag0146 Cone-Chr6:740829 1.92E-191 dispersed
Cone6ag0146 Cone-Chr6:740829 Cone7ag0178 Cone-Chr7:747060 3.18E-211 dispersed
Cone12ag1466 Cone-Chr12:10498908 Cone6ag0146 Cone-Chr6:740829 1.85E-205 wgd
Cone14ag1063 Cone-Chr14:8962512 Cone6ag0146 Cone-Chr6:740829 0 wgd
Cone3ag1494 Cone-Chr3:33561670 Cone6ag0146 Cone-Chr6:740829 1.56E-41 wgd
Cone6ag0146 Cone-Chr6:740829 Cone8ag1512 Cone-Chr8:11426498 1.01E-198 wgd
Cone6ag0146 Cone-Chr6:740829 Cone9ag0171 Cone-Chr9:760275 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82904 PF05553 DUF761 5.40E-15 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0146 - - - 0.0