Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0153 ATGGAGGTTCAAAGATCTGTCTGTCTTCCTCTACTCCTTCTGCTTTGTAGTTTGTTTTCCTTCTCAGACGCATTCAAGTACTATGTCGGTGGAAGAGACGGATGGGTCTTGAACCCTTCTGAGAGTTACGATCACTGGGCTTCACGTAACAGATTTCTTGTCGGCGACATACTCTTTTTTAGGTATAAGCAAGGATCGGACTCTGTTTTGGTAGTGAATAAGGACGACTACGACAAATGCAACAGGAACAACCCTACACAGAAACTGGAAGGAGGTGATTCAGAATTCACCATTGACAGGCCAGGACCTTATTACTTCATTAGTGGAAAGGAGGGAAATTGTGAAAAGGGCCAGAAACTAGGCCTTGTCGTTATTACCCCTAGAAAGCCAAAATCTCAGTCCACTCCACCGTCTTCTTCCACTCCCAAACCCTCCCCTGCACCCACTGCTCACCCTCCCGTTCCCGTTACGCCGGCACCAAAAGGGGCAGCCAAGTCGCCACCACCCACGGCTGAGTCACCCAAATCCGGTACTTCACCGTCTCCCTCAGGTGGGTCAGAAACACCCAAAAAGGCTCCTTCGCCATCAAGCCATCAGACTTCTCCATCTCCTTCAGGAGCAGAGACGCCAAAAACAGCTCCATCTCCAGCTAGCCACTCTGCTTCTTCTCCTACTCCTTCACAGTCTAAATCTCCATCTCCAGGATCTGCAGGCTCTGGATCACCTAAAAGTGCATCATCTCCGTCAAGCTTCAATATTTCCCCATCATCTTCCGGTACTAGCACTCCATCTCCGTCAGGCTCCTCCATCTCTCCATTACCTTCTGGTTCTCATACACCATCTCCTAAAAAAGCTCCATCTCCGTCAGGCTACTCCATCTCTCCATCACCTTATGGTTCTCATACACCATCTCCTATTAAAGCTCCATCTCCGTCAGGCTACTCTATCTCTCCATCACCTTATGGTTCCAAAACACCATCTCCTATAAAAGCTCCATCTCCATCAGGCTCCTCTGCTTCTTCCCCTGGTCCTGCAGAGTCCAAAACGCCAGTAAGTTCTCCGTATGGGTCTCCGGTCGGTACATCACCGAGAGGATCGCCGTTCGGGTCGCCAAATTCTAAATCACCAGAAGGATCTCCGTTCGGGTCACCAAATTCTAAATCACCAGAAGGATCTCCGTCCGGGTCAGCAAATTCTAAATCACCAGAAGGATCTCCGTCCGGGTCAGCACCGTTTGGGTCACCCACTACATCAATAACAGCCCCTGCTCTAGCTCCATCCTTCGATTCCCCTCCAGCCCCCCCTCCATCTTCATCGCCTGCGCCGGGATCCTCATCCTCTCCGTCTCCATCTTCGTCTCCACCTTCGTCTCCGTCGGCAAATGTTCTGGCGCCGGCACCTGCCAAGTCGTCTGCATGGACTCTAACTCCCTCTGGTTGTATGCTATTTACGGTTTCAGTTGCATTTAGCTTCCTCGTCAATGGTATGATTAGTACTACAACTCTTGCTTAA 1512 50.33 MEVQRSVCLPLLLLLCSLFSFSDAFKYYVGGRDGWVLNPSESYDHWASRNRFLVGDILFFRYKQGSDSVLVVNKDDYDKCNRNNPTQKLEGGDSEFTIDRPGPYYFISGKEGNCEKGQKLGLVVITPRKPKSQSTPPSSSTPKPSPAPTAHPPVPVTPAPKGAAKSPPPTAESPKSGTSPSPSGGSETPKKAPSPSSHQTSPSPSGAETPKTAPSPASHSASSPTPSQSKSPSPGSAGSGSPKSASSPSSFNISPSSSGTSTPSPSGSSISPLPSGSHTPSPKKAPSPSGYSISPSPYGSHTPSPIKAPSPSGYSISPSPYGSKTPSPIKAPSPSGSSASSPGPAESKTPVSSPYGSPVGTSPRGSPFGSPNSKSPEGSPFGSPNSKSPEGSPSGSANSKSPEGSPSGSAPFGSPTTSITAPALAPSFDSPPAPPPSSSPAPGSSSSPSPSSSPPSSPSANVLAPAPAKSSAWTLTPSGCMLFTVSVAFSFLVNGMISTTTLA 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 768003 770049 - Conep06aG0015400.1 Cone6ag0153 439037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0153 503 MobiDBLite consensus disorder prediction 127 470 - -
Cone6ag0153 503 CDD OsENODL1_like 25 125 IPR041846 -
Cone6ag0153 503 FunFam Early nodulin-like protein 1 24 129 - -
Cone6ag0153 503 PANTHER BLUE COPPER PROTEIN 19 167 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cone6ag0153 503 MobiDBLite consensus disorder prediction 137 167 - -
Cone6ag0153 503 SUPERFAMILY Cupredoxins 24 124 IPR008972 -
Cone6ag0153 503 MobiDBLite consensus disorder prediction 176 424 - -
Cone6ag0153 503 Pfam Plastocyanin-like domain 35 118 IPR003245 GO:0009055(InterPro)
Cone6ag0153 503 Gene3D - 24 127 IPR008972 -
Cone6ag0153 503 MobiDBLite consensus disorder prediction 427 455 - -
Cone6ag0153 503 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0978 Cone-Chr17:7553243 Cone6ag0153 Cone-Chr6:768003 4.35E-29 dispersed
Cone20ag0319 Cone-Chr20:1416036 Cone6ag0153 Cone-Chr6:768003 6.46E-31 dispersed
Cone12ag1470 Cone-Chr12:10517081 Cone6ag0153 Cone-Chr6:768003 1.16E-41 wgd
Cone6ag0153 Cone-Chr6:768003 Cone9ag0178 Cone-Chr9:788605 7.75E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0153 - - - 0.0