Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag0160 | ATGACCGGCAGAGAAATTCTCCACAAGATGAAGGAAAAAGTCGGGTTGGGATCATCAGATACTGATTCCGGAAAAGGAAAGAGCAAGATTTCAAAGAACGTAACACTTGGATTCCACTTGGTTAAGGGAAAATTCCACCCTGCCATGGAAGACTACGTAGTTGCTCAGTTTAAGCAAGTTGATGACCATGAGCTTGGTTTATTCGCAATATTTGATGGCCATTTAAGCCACGATATTCCGGATTACTTACGGTCTCATTTGTTCGACAATATTATCAATGAGCCCTCCTTTTGGACCGAGCCCGAGATTGCGGTTAGGGAAGCATATCGTAGAACCGATGCGTACATTTTGGAGAAGGCAGTTGATTTGGGTAAAGGGGGTTCAACTGCAGTTACGGCTATACTTATCAACTGTCAAAAACTGGTAGTTGCAAATGTAGGTGATTCCCGTGCAGTTATCTGCAGAAACGGTCTTGCCGTACAGTTATCGGTTGACCACGAGCCGAGCATGGAAAGAGAAATCATTGAGAACAAAGGTGGTTTTGTCTCAAACTTTCCTGGAGACGTTCCTCGTGTTGATGGACAATTAGCTGTAGCACGGGCATTCGGCGATAAGAGCTTGAAGAAGCATCTAAGCTCTGAACCTCATGTAATAGTGGAATCTATAAATGAAGCGACAGAGTTTATTATCTTGGCAAGTGATGGATTATGGAAGGTAATGTCGAATCAAGAAGCGGTAGATTTGATCAAACAGATCAATGATGCTCGGGCAGCGGCCAAGCACTTGACTGAAGAAGCTCTTATTAGGAAGAGCACTGATGATATTTCCTGTGTAGTTGTAAGACTCCATTAA | 852 | 43.31 | MTGREILHKMKEKVGLGSSDTDSGKGKSKISKNVTLGFHLVKGKFHPAMEDYVVAQFKQVDDHELGLFAIFDGHLSHDIPDYLRSHLFDNIINEPSFWTEPEIAVREAYRRTDAYILEKAVDLGKGGSTAVTAILINCQKLVVANVGDSRAVICRNGLAVQLSVDHEPSMEREIIENKGGFVSNFPGDVPRVDGQLAVARAFGDKSLKKHLSSEPHVIVESINEATEFIILASDGLWKVMSNQEAVDLIKQINDARAAAKHLTEEALIRKSTDDISCVVVRLH | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 787673 | 789643 | - | Conep06aG0016100.1 | Cone6ag0160 | 439044 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag0160 | 283 | CDD | PP2Cc | 42 | 282 | IPR001932 | - | |
Cone6ag0160 | 283 | SUPERFAMILY | PP2C-like | 32 | 283 | IPR036457 | - | |
Cone6ag0160 | 283 | Coils | Coil | 245 | 265 | - | - | |
Cone6ag0160 | 283 | SMART | PP2C_4 | 31 | 280 | IPR001932 | - | |
Cone6ag0160 | 283 | Gene3D | - | 29 | 283 | IPR036457 | - | |
Cone6ag0160 | 283 | Pfam | Protein phosphatase 2C | 49 | 275 | IPR001932 | - | |
Cone6ag0160 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 282 | IPR001932 | - | |
Cone6ag0160 | 283 | PANTHER | PROTEIN PHOSPHATASE | 31 | 280 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cone6ag0160 | 283 | FunFam | Probable protein phosphatase 2C 39 | 25 | 283 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag0169 | Cone-Chr15:816568 | Cone6ag0160 | Cone-Chr6:787673 | 7.92E-32 | dispersed | |
Cone6ag0160 | Cone-Chr6:787673 | Cone7ag1594 | Cone-Chr7:10900747 | 1.28E-109 | dispersed | |
Cone6ag0160 | Cone-Chr6:787673 | Cone8ag1519 | Cone-Chr8:11461738 | 2.65E-135 | wgd | |
Cone6ag0160 | Cone-Chr6:787673 | Cone9ag0184 | Cone-Chr9:805263 | 2.91E-190 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag0160 | K17506 | - | vvi:100241870 | 445.662 |