Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0161 ATGGCTGAGGCAGAGATTATAGTAGAGACTACTGGATCGAGGTTTAGTTCATTGGAACTTATTGGTAAAGGATCTTTCGGTGATGTCTACAAGGGGCTTGATAAGGATCTTAACAAAGAAGTTGCTATAAAAGTAATTGATTTGGAAGAAGCGGAGGATGAAATTGAGGACATACAGAAGGAAATTTCTGTTTTGTCACAATGTAGATGTCCCTATATTACTGAGTACTATGGTTCTCATCTTCATGAGACTAAATTATGGATAATAATGGAATACATGGCTGGTGGCTCAGTTGCTGACCTGCTTCAATCCGGACCTCCACTGGATGAAATGTCTATTGCTTGCATTCTATGCGACTTGCTGCATGCTATTAATTATTTGCATAGTGAAGGAAAAATTCACAGGGATATTAAAGCGGCCAATATATTGTTGAGTGAACAAGGTGATGTTAAGGTTGCAGATTTCGGCGTTTCTGCCCAATTAACGAGGACAATATCCAGGAGAAAGACATTTGTAGGAACACCTTTCTGGATGGCCCCAGAGGTAATTCAAAATTCAGATGGGTACGATGAAAAGGCAGATATCTGGTCCCTTGGAATCACGGCTATTGAGATGGCAAAAGGTGAACCTCCGCTTGCTGATCTTCATCCAATGAGAGTTCTCTTTATAATTCCTCGAGAAAATCCACCTCAGTTGGATGAGCATTTCTCTCGTCCTATGAAAGAATTTGTGTCGCTGTGCCTGAAGAAAGTACCTGCTGAGAGACCAAGCGCCAAGGAGCTTTTAAAGCACCGATTTATTAAGAATGCCAAGAAGAGTCCGAGGCTTCTGGAGAGAATAAGTGAGCGTCCAAAGTACCTAATAAAGGAAGATGTGGAAGCATCCAAAAATGGTACTAGAGATATGGGGGAGATGTCTGATACTGTGAAAGTCTCCAGAAATTTAAAAGAAGAGAGTGCCCAAGCCAGTAATCAGGGCAGAACCATAAAAAATGCAGGATGGGACTTCAGCATTGGTGCATCACAGAGTACGGGTACTATTCGAAGTGTTAAACCACCTCCAATTAGGGAAAAGAAGTTTGCACTTTCTTCTGGTCATGCTCCTCCTTTAAGAATTTCAGACAGAGGTAACCCACGTGAAGATACCTTCTCAAGAGATGCTAGAGATTCATTCATTACGGAACGTCTGGAGAATAATAGTGACGACGAAGAGTTTAGTGGCTCAGGAACTGTTGTTATCCGATCCCCTAGAGGATTTTTATCACCTACTCAGTATCATCATCAAAGCACCACGTCTGAGAACACATATGCACCTTTTAAAGACACTTCTTCTAGCGGTACTGTTGTCTTTCGAAGCCAACATGATGATTTGGGTTCTCCTCAGACGCCAAGATCCAGATTGGGAATTCAAGAGAGGACTTCAAGCGCCTCACTCGAAGAAGAGAGTGCAATAAATCTGGCAGAGGCAAAGGCTGCAATGCAAGCAGGATTAAGGAAACCAAATGTTAGAGAAAGGTCTGGCAAGATCAGCAACAAAGGGAAAGAAGATAGAAAAAGAGAGCTAATGACAAGTAGCTCTGATTCTTCCAGACATTCTCATGAATACTATGACGCACCAAAAGCATTGACAAGATCGCAAACAAGTGATGATGAAGAAATAGCTAAAGTAACAGCATCCTCTCCTCCGTTATCAATTTTGCTTATCCCATCCTTGAAACAGGCTGTAGCTGATGAGTTGGAAGGACCTGCAGTGAATTCCGTTGCTAATTCTTTTATAAATATGGAGCTGAAAAATCCAGGATCTTGTGAAATTTTTATACGCAAGTTGCTTCAGCAATTGGGAAGTTCTAATGAAGCATCATTGAAGGATTTGCAAGCGCTAGCAGCTCATATTTTCTCCAAAGGCAAGTCAGTTTCTGAAGAAACAAATGTGAATGCAGATGCTGATAGCAGTAAAAAGCAACCAAACACAGAAACTAATTCAAATTCCAATTTGAGCCCTCTTGCTAGGTTTTTGCTCTCGAGATGGCAAGGACAAGTATCAAGGGATCTCAACGCAGCTTAG 2064 41.52 MAEAEIIVETTGSRFSSLELIGKGSFGDVYKGLDKDLNKEVAIKVIDLEEAEDEIEDIQKEISVLSQCRCPYITEYYGSHLHETKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILCDLLHAINYLHSEGKIHRDIKAANILLSEQGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSDGYDEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKEFVSLCLKKVPAERPSAKELLKHRFIKNAKKSPRLLERISERPKYLIKEDVEASKNGTRDMGEMSDTVKVSRNLKEESAQASNQGRTIKNAGWDFSIGASQSTGTIRSVKPPPIREKKFALSSGHAPPLRISDRGNPREDTFSRDARDSFITERLENNSDDEEFSGSGTVVIRSPRGFLSPTQYHHQSTTSENTYAPFKDTSSSGTVVFRSQHDDLGSPQTPRSRLGIQERTSSASLEEESAINLAEAKAAMQAGLRKPNVRERSGKISNKGKEDRKRELMTSSSDSSRHSHEYYDAPKALTRSQTSDDEEIAKVTASSPPLSILLIPSLKQAVADELEGPAVNSVANSFINMELKNPGSCEIFIRKLLQQLGSSNEASLKDLQALAAHIFSKGKSVSEETNVNADADSSKKQPNTETNSNSNLSPLARFLLSRWQGQVSRDLNAA 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 791788 796902 + Conep06aG0016200.1 Cone6ag0161 439045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0161 687 SMART serkin_6 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0161 687 Coils Coil 41 68 - -
Cone6ag0161 687 CDD STKc_MST3_like 13 287 - -
Cone6ag0161 687 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524(InterPro)
Cone6ag0161 687 MobiDBLite consensus disorder prediction 424 480 - -
Cone6ag0161 687 MobiDBLite consensus disorder prediction 639 664 - -
Cone6ag0161 687 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0161 687 MobiDBLite consensus disorder prediction 494 550 - -
Cone6ag0161 687 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0161 687 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 13 647 IPR050629 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)
Cone6ag0161 687 MobiDBLite consensus disorder prediction 360 409 - -
Cone6ag0161 687 Gene3D Transferase(Phosphotransferase) domain 1 12 306 - -
Cone6ag0161 687 MobiDBLite consensus disorder prediction 373 402 - -
Cone6ag0161 687 SUPERFAMILY Protein kinase-like (PK-like) 13 310 IPR011009 -
Cone6ag0161 687 MobiDBLite consensus disorder prediction 501 550 - -
Cone6ag0161 687 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0901 Cone-Chr13:7955235 Cone6ag0161 Cone-Chr6:791788 2.43E-78 dispersed
Cone19ag0899 Cone-Chr19:7013667 Cone6ag0161 Cone-Chr6:791788 1.29E-78 dispersed
Cone3ag0708 Cone-Chr3:3623830 Cone6ag0161 Cone-Chr6:791788 2.33E-28 dispersed
Cone6ag0161 Cone-Chr6:791788 Cone8ag0549 Cone-Chr8:4082559 2.72E-58 dispersed
Cone14ag1056 Cone-Chr14:8907549 Cone6ag0161 Cone-Chr6:791788 8.60E-299 wgd
Cone6ag0161 Cone-Chr6:791788 Cone9ag0187 Cone-Chr9:814399 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82906 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0161 K08838 - vvi:100258981 932.939