Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0204 ATGACGTCGGGGACGAGGCTTCCGACATGGACGGAGAGGGAGAACAACAAGAGGAGGGAGCGGCGGAGGAGAGCTATAGCGGCGAAGATATTTACCGGTCTGAGAATGTACGGTAATTTCAAGCTCCCCAAGCACTGCGACAACAACGAGGTCCTCAAAGCTCTCTGCAACGATGCCGGTTGGACCGTCGAGCCTGACGGCACCACCTACCGTAAGGGCTGCAAGCCTACTGATCAAATGGATTGCATTGGGGCGTCCGCTACTGCCAGTCCAATGAGCCCATGCTCATCTAATCATTTAAGCTTTCATCGGTCCTACAATCCAAGCTGCTCCTCCTCTTTTCCAAGCCCAGCCTCTTCCTCATATGCTGCTAATCCAAATGCTGACCCCAATTCCTTGATCCCGTGGCTCAAAAACCTTTCATCCTCCTCTTCCAAGTTCCCCGATCATCACTACATCCACAACGGCTCTATCAGTGCTCCTGTCACCCCTCCTCTGAGCTCCCCTCCAAGATCACCCAGAATTAAAGCCAATTGGGAGAACCAGTACACCCACACTAGTCGCCAGATTGTTCCTGATCCAGAATGGCTTTCTGGAATTAGAACTCCTTGGAGTGGGCCAACTTCTCCAACATTCAGTCTTGTCTCTTCAAACCCATTTGGTTTCAAGGAGGATGCTTTAGCAGGTGGTGGGTCCCGCTTGTGGACTCCCGGGCAAAGTGGGGCATGCTCTCCTGTCATTGCTTTGGGGTCTCAGCACACTGCTGATATTCCAATGTCTGAAGCAGCTTCTGATGAGTTTGCATTTGGAAGCGATGCAGCTGGCATAGTTAAGCCGTGGGAAGGAGAAAGGATTCATGAAGAGAGTGGCTGTGATGATCTGGAACTCACCCTTGGAAGCTCAAAGACCAGGTACTTGTAG 921 51.68 MTSGTRLPTWTERENNKRRERRRRAIAAKIFTGLRMYGNFKLPKHCDNNEVLKALCNDAGWTVEPDGTTYRKGCKPTDQMDCIGASATASPMSPCSSNHLSFHRSYNPSCSSSFPSPASSSYAANPNADPNSLIPWLKNLSSSSSKFPDHHYIHNGSISAPVTPPLSSPPRSPRIKANWENQYTHTSRQIVPDPEWLSGIRTPWSGPTSPTFSLVSSNPFGFKEDALAGGGSRLWTPGQSGACSPVIALGSQHTADIPMSEAASDEFAFGSDAAGIVKPWEGERIHEESGCDDLELTLGSSKTRYL 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 962545 966338 + Conep06aG0020600.1 Cone6ag0204 439088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0204 306 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 141 IPR008540 -
Cone6ag0204 306 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 305 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Cone6ag0204 306 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0204 Cone-Chr6:962545 Cone9ag0944 Cone-Chr9:4662970 1.00E-128 dispersed
Cone6ag0204 Cone-Chr6:962545 Cone6ag0940 Cone-Chr6:4839207 1.51E-130 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46267 PF02737 3HCDH_N 4.20E-41 CL0063 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0204 - - - 0.0