Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0207 ATGGATTTTTCACTGATTGATTTGGTGTATGAAACAGTGAAAACCCTTCAAGCAATATCCTCAAAACTAGAGAAGTTGGATTGGGATGTGAATCGGAATTCTTGCATTAAAGGTGAAGGATTTGAAAACACAGTCACCATTCCGGGAAAAATCTTAAGGACAGTAACTTGCAATTGCTCTTCTATTCTTTGCCATGTCATACGAATAGAGCTGAAGGGTCAAAACTTAACCGGGACTTTTCCGGCTGAATTCGGAAACCTCCCTCAGTTACAGGTCCTTGACCTCACTCGCAATTATATAGATGGAAACATTCCTGCAACTTTGGCTCACATTCCACTTGTAAATCTGTCACTTATCGGAAATCGGCTGAGCGGTCCGATTCCTAAAGAAATCGGCAACATTCATACCCTTAAAGAGCTGGTATTGGAAGATAATCTCTTAGAAGGAAGTCTTCCGGACAGCCTCGGAAATTTGACCAGCTTGGACAGACTGTTGCTGTCTGCAAACAATTTTACAGGAACTATACCGGAATCATATGGCCGGTTAAAGAACTTAACTGATTTTAGGATAGATGGGAATGGGATAACAGGGAAGCTGCCTGAATTCATAGGCAATTGGACCAAGATTGACAGATTGGATATGCAAGGAACATCTATGACAACACCAATCCCTTCGACATTATCTCGGTTAACTAGCTTAACCAAACTGAGGATTTCTGATTTGAATGGATTGACAACGAGATTCCCTGATCTTTCAGGATTGACAAAATTAGAAGAATTGGTCTTGAGAAATTGCTTAATTAAAGGAAGAATACCGGACTACATCGGAGAAATAAGTGTACTAAAAACTCTGGACTTGAGCTTCAACATGTTAACCGGTCAGATTCCTGAGACATTTGAAACACTTACCGATAATGAATCTAATAGATACATGTTTATGAGCAACAACTCGTTGAGCGGCCAAGTACCGTCTTGGATAATAGACAGTCAGAAGAACATAGATTTATCTTACAACAATTTCACAGGATCTTCTGAAACTAGTTGTAGACAGTCGCCGGTGAATTTAGTTTCGAGTTTTTCATCATTGGCAAATGAGAAAAATGTTTGGTGCCTCGAGAAAGATTTCCCATGCACGGAGAAAGCTAATTATCATTCATTGTTTATCAACTGTGGAGGAAGCAAGTTAGAGATTGACGGAAACAACTACGAAGAAGACTTAACAAGAGAAGGCCAATCAAACTTCTTTTCAGCTTCCGAAAAATGGGGTTGTAGTAGTGCAGGTACCTACATGGGGTTGGAGGATGCAGACTACATAGTATCAAATGATTTTGATCTGAACATAAGTGGTCCCGGATTCTACCAAACGGCTCGGGTTGCTCCTGTTTCACTCAAGTACTATGGTTTTTGCTTGAGGAAAGGTAGTTACAATGTGAAGCTGCATTTTGCAGAAATCATGTATAGTAACGATCAAACATTTAGTAGCCTTGGAAGACGCTTATTCGACTTATCAATTCAAGGAATATTGATTAAGAAGGATTTTAATATAATGGAAGAAGCCGGTGGGGTTGGTATGGGGTTTGTTTTGGAAGAGAAAGATGTCGTTGTTAGTGGAAGCACTCTTGCGATTCATTTATATTGGGCTGGAAAAGGAACTAATGCTATTCCTAATAGAGGTGTATATGGACCTCTTATATCTGCTATCACAGTTACACCAAACTATAAATTCGACACGGGAAGCCTATCTGCCGGAGCTATAGCAGGCATTGTAGTTGCTTTATGTGTGCTTCTCTTGTTAGTATTGGAAGGCCTCAGAAGAAAAGGTTACTTAGGTAGGAAGGACATAGAGGATAAAGAATTACGCGGCCTAGATTTGCAAACCGGTTATTTCAGCTTGAGACAAATCAGAGCTGCAACCGGTAACTTTGAGCCTGAGAATAAAATAGGCGAAGGTGGTTTCGGGCCAGTCTACAAGGGTGAATTGTCGGATGGCACTTTAATTGCCGTAAAGCAGCTATCTTCAAAATCGAAACAGGGAAACCGTGAATTTGTGACAGAGATTGGCATGATATCTGGATTGCAACACCCGAATCTTGTTAAGCTTTATGGTTGTTGTATAGAAGGAAACCAAATGCTACTTATTTATGAGTACCTCGAAAATAACTCTCTTGCCCAAGCACTTTTCGGGGAACAAAGATTACAGTTGGACTGGTCTACGAGGAAGAAGATATGCTTAGATATAGCAACGGGATTGGCTTACCTTCATGAGGAATCAAGGCTGAAAATTGTTCATAGAGATATAAAGGCTACAAATGTGTTGCTTGATAAGAATCTAAATGCCAAGATTTCTGATTTCGGTTTAGCTAAACTTGATGAAGAGGAGAATACCCATATAAGCACAAGAGTGGCCGGCACAATAGGCTATATGGCTCCCGAGTACGCAATGAGAGGTTACTTGACCGACAAGGCAGATGTCTACAGTTTCGGAGTTGTTGTGTTAGAGCTTGTTAGCGGAAAAAGCAACACAAATTACAGGCCAAAGGAGGAGTTTGTATATCTTCTTGATTGGGCCTATGTTTTACAAGAGCAAGGGAACCTTCTAGAACTTGTCGATCCGAGCCTTGATTCAAACTACACAAAGGAAGAGGCAATGACAATGCTCAATATAGGTCTTTTATGCACCAACCCGTCTCCTACTCTCAGACCATCTATGTCGTCAGTTGTGAGTATGCTTCAAGGAAAAATTGAAGTGCAAGCACCGATCATTAAGCGCAAATCGGTGGAACAAGATGCACGTTTTAGAGCCTTTGAGATGCTCTCTCAGGATAGTCAATCTCATGTCTCGGAGTCTTCACTAGACACGAGTCAGGTACAAAACAGCACCATGTTAACTGATGGTCCACAGATTGACTCATTGGTTTCAGCCGGAAGCTCGATGAAGCTCATCAAGGAGACTTAG 2955 40.95 MDFSLIDLVYETVKTLQAISSKLEKLDWDVNRNSCIKGEGFENTVTIPGKILRTVTCNCSSILCHVIRIELKGQNLTGTFPAEFGNLPQLQVLDLTRNYIDGNIPATLAHIPLVNLSLIGNRLSGPIPKEIGNIHTLKELVLEDNLLEGSLPDSLGNLTSLDRLLLSANNFTGTIPESYGRLKNLTDFRIDGNGITGKLPEFIGNWTKIDRLDMQGTSMTTPIPSTLSRLTSLTKLRISDLNGLTTRFPDLSGLTKLEELVLRNCLIKGRIPDYIGEISVLKTLDLSFNMLTGQIPETFETLTDNESNRYMFMSNNSLSGQVPSWIIDSQKNIDLSYNNFTGSSETSCRQSPVNLVSSFSSLANEKNVWCLEKDFPCTEKANYHSLFINCGGSKLEIDGNNYEEDLTREGQSNFFSASEKWGCSSAGTYMGLEDADYIVSNDFDLNISGPGFYQTARVAPVSLKYYGFCLRKGSYNVKLHFAEIMYSNDQTFSSLGRRLFDLSIQGILIKKDFNIMEEAGGVGMGFVLEEKDVVVSGSTLAIHLYWAGKGTNAIPNRGVYGPLISAITVTPNYKFDTGSLSAGAIAGIVVALCVLLLLVLEGLRRKGYLGRKDIEDKELRGLDLQTGYFSLRQIRAATGNFEPENKIGEGGFGPVYKGELSDGTLIAVKQLSSKSKQGNREFVTEIGMISGLQHPNLVKLYGCCIEGNQMLLIYEYLENNSLAQALFGEQRLQLDWSTRKKICLDIATGLAYLHEESRLKIVHRDIKATNVLLDKNLNAKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVVLELVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLDSNYTKEEAMTMLNIGLLCTNPSPTLRPSMSSVVSMLQGKIEVQAPIIKRKSVEQDARFRAFEMLSQDSQSHVSESSLDTSQVQNSTMLTDGPQIDSLVSAGSSMKLIKET 984
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 977819 982906 - Conep06aG0020900.1 Cone6ag0207 439091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0207 984 Pfam Protein tyrosine and serine/threonine kinase 644 909 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag0207 984 ProSiteProfiles Protein kinase domain profile. 641 921 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0207 984 CDD STKc_IRAK 647 912 - -
Cone6ag0207 984 Gene3D Transferase(Phosphotransferase) domain 1 717 933 - -
Cone6ag0207 984 SUPERFAMILY L domain-like 51 302 - -
Cone6ag0207 984 Gene3D Phosphorylase Kinase; domain 1 610 716 - -
Cone6ag0207 984 SUPERFAMILY Protein kinase-like (PK-like) 624 930 IPR011009 -
Cone6ag0207 984 MobiDBLite consensus disorder prediction 943 968 - -
Cone6ag0207 984 FunFam Putative LRR receptor-like serine/threonine-protein kinase 717 922 - -
Cone6ag0207 984 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 248 344 - -
Cone6ag0207 984 Gene3D Ribonuclease Inhibitor 14 176 IPR032675 -
Cone6ag0207 984 Gene3D Ribonuclease Inhibitor 246 371 IPR032675 -
Cone6ag0207 984 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 610 716 - -
Cone6ag0207 984 Pfam Leucine Rich Repeat 89 110 IPR001611 GO:0005515(InterPro)
Cone6ag0207 984 Pfam Leucine Rich Repeat 137 158 IPR001611 GO:0005515(InterPro)
Cone6ag0207 984 Pfam Leucine Rich Repeat 281 302 IPR001611 GO:0005515(InterPro)
Cone6ag0207 984 Gene3D - 383 573 - -
Cone6ag0207 984 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 27 933 IPR051824 -
Cone6ag0207 984 SMART serkin_6 641 908 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0207 984 Pfam Malectin domain 386 567 IPR021720 -
Cone6ag0207 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 761 773 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag0207 984 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 383 572 - -
Cone6ag0207 984 FunFam Leucine-rich repeat receptor protein kinase EMS1 130 212 - -
Cone6ag0207 984 Gene3D Ribonuclease Inhibitor 177 245 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0229 Cone-Chr1:1463415 Cone6ag0207 Cone-Chr6:977819 9.78E-217 dispersed
Cone4ag1426 Cone-Chr4:11369690 Cone6ag0207 Cone-Chr6:977819 6.14E-74 dispersed
Cone5ag1634 Cone-Chr5:11537601 Cone6ag0207 Cone-Chr6:977819 2.54E-223 dispersed
Cone6ag0207 Cone-Chr6:977819 Cone9ag0235 Cone-Chr9:991865 0 dispersed
Cone6ag0206 Cone-Chr6:969913 Cone6ag0207 Cone-Chr6:977819 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82909 PF03110 SBP 2.10E-31 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0207 - - - 0.0