Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone6ag0210 | ATGCCTGGAAACAAGTACAACGGTAATTCAGACCATATTCATGGTCGACTGGAAAGGCTCTTGAGAGAAAGAGAGCAAAGGAAAAACAGCACGGCTTCAAACTCAAACGAGTCAAATGACAATTACAAGGACAATGAATCGATAGAACGTGATTTTCGCTTCAGAGAAGATGATAACTCTGGAGTTTCTTGTGTTGAAAAATTCTTTGAGGCGTCTGTACCTACAAGGTCATTTACTGAGGGATGCGAGAGGCAAGATGGAAAAACTCTTAAACATCGTCTTCTGGTTGTGGCTAACAGGCTGCCGGTCTCTGCAGTTAGGAGAGGTGAAGACTCCTGGTCTGTAGATGTAAGTGCTGGTGGTCTAGTCACTGCCTTTCTGGGGGTAAAGGAGTTTGAGGCAAGATGGATTGGCTGGGCTGGTGTAAATGTACCGGACGAAACAGGACAAGAGGCGCTAAAAAAAGCTTTAGCTGAAAAGAGATGTATCCCTGTATTCCTCGATGAAGAAATCGTTCATCAATATTACAATGGGTACTGCAACAATATTCTCTGGCCCCTTTTTCATTACCTCGGACTTCCACAGGAAGATCGTCTTGCCACCACCCGTAGTTTTCAGTCGCAGTTTGCTGCATATAAGAAGGCAAATCAAATGTTTGCTGATGTGGTTAACCAGCACTACGAAGAAGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTTCTACCTAAATGTCTGAAGGAACACAACAGCAAGATGAAAGTTGGCTGGTTTCTCCACACACCATTTCCTTCTTCTGAAATTCACAGGACACTGCCATCTCGATCTGAGCTACTGCGTTCTGTTCTTGCCGCAGATTTAGTTGGTTTTCACACCTATGACTATGCCCGCCATTTTGTAAGTGCTTGCACACGTATTCTTGGACTTGAGGGTACACCTGAAGGAGTTGAGGATCAAGGGAGGTTGACCCGAGTAGCTGCATTTCCTATTGGCATAGACTTGAATCGGTTCATAAATGCACTCCACCTTCCTCAAGTCCAGGAACACATCAAGGAATTAAAGGAAAGATTTAAAGGTCGAAAGGTGATGTTAGGTGTTGATCGCCTTGATATGATAAAAGGAATTCCTCAAAAGATACTGGCTTTTGAAAAATTTTTGGAGGAAAATCATAATTGGCATGGTAAAGTAGTATTGTTGCAAATTGCGGTGCCAACAAGAACAGATGTTCCAGAGTATCAAAAACTAACAAGCCAGGTTCATGAAATTGTTGGGCGCATTAATGGGAGATTTGGAACCTTGACTGCAGTCCCAATACATCATCTGGATCGTTCACTCGACTTTCATGCACTATGTGCTCTGTATGCTGTTACTGATGTAGCACTTGTCACATCTTTGAGAGATGGAATGAATCTTGTAAGCTATGAGTTTGTGGCATGCCAAGATGCAAAGAGAGGGGTCCTCGTTCTTAGTGAGTTTGCTGGAGCTGCACAGTCTCTGGGTGCGGGAGCACTATTAGTGAACCCCTGGAATATAACAGAAGTTGCTAATTCAATTGATAGAGCTCTTAATATGACTGCTGAAGAGAGGGAAAAACGTCACAAGCATAACTATGAGCATGTGACAAGACATACTGCCCAAGATTGGGCTGAAATTTTCGTTAGTGAACTGAAGGACACTGTTGTTGAAGCTGAACTAAGGATCCGACATCCTTCTCTTCCATTTCAGGATGCAATTAGACAGTATTTGCGATCCCATAATCGTCTGCTCATATTGGGATTTAATGCTACATTAACTGAACCAGTCGACACGCTTGAGAGAAGGGGAGACCAAATTAAAGATATGGAACTAAAGTTACACCCTGACCTACAAGAACAGTTGACGGCACTTTGCAGCGACCCAAACACAACACTTGTTATCCTTAGTGGGAGTGTCAGAGAAGTTTTAGATGAGAATTTTGGACATTATGAGATGTGGTTAGCAGCAGAGAATGGGATGTTTCTGCGCCACACAAGGGGAGATTGGATGACTACAATGCCAGAGCATTTAAATATGGAATGGGTCGATAGTGTGAAGCATGTTTTCACGTGTTTTACTCAGAGAACTCCTCGATCATATGTTGAAACCCGGGAAGCTTCACTTGTTTGGAATTATAAATATGCAGATATGGAATTTGGAAGACTTCAAGCAAGGGATATGTTGCAGCATCTCTGGACAGGCCCAATATCTAATGCATCTGTTGATGTTGTACAAGGTAGTCGTTCAGTTGAGGTGCGAGCTGTTGGTGTTACAAAGGGCACAGCAATCGATCGGATATTGGGAGAGATGGTTCACAGTAAGTCAATGACAATTCCTATAGATTATGTCCTGTGTATAGGGCATTTTCTCGGAAAGGATGAAGATGTCTATACCTTCTTTGAGCCACTTCCTACCGACCATATCAGTATGGCAAGAACCAAGGGAACAGATGTGCCCAAGGTAGAGAGAAGATCATTAAAATTCCCACCAAACAGAAGCGGGTCTAAGTCAACTCATAATAAAACCCGGGATTTGCCAAACATTGAGAGGAAAACCAACAATCAAGCCTCTAGCAATGGGCGTAGTAAGCAATCACCCGAAAATATTCAATGGAATGTGCTTGATCTCAAGGTTGAGAATTACTTCTCTTGTGCTGTTGGGCGGACCAGAACATCTGCCCGGTACCTTCTGAATGGCTCAGGTGACGTTGTTTCATTTCTAAGAGAACTGGCCAATGCATCTTTGTTCAACACTTAA | 2775 | 42.99 | MPGNKYNGNSDHIHGRLERLLREREQRKNSTASNSNESNDNYKDNESIERDFRFREDDNSGVSCVEKFFEASVPTRSFTEGCERQDGKTLKHRLLVVANRLPVSAVRRGEDSWSVDVSAGGLVTAFLGVKEFEARWIGWAGVNVPDETGQEALKKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNQHYEEGDVVWCHDYHLMFLPKCLKEHNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDLNRFINALHLPQVQEHIKELKERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENHNWHGKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDAKRGVLVLSEFAGAAQSLGAGALLVNPWNITEVANSIDRALNMTAEEREKRHKHNYEHVTRHTAQDWAEIFVSELKDTVVEAELRIRHPSLPFQDAIRQYLRSHNRLLILGFNATLTEPVDTLERRGDQIKDMELKLHPDLQEQLTALCSDPNTTLVILSGSVREVLDENFGHYEMWLAAENGMFLRHTRGDWMTTMPEHLNMEWVDSVKHVFTCFTQRTPRSYVETREASLVWNYKYADMEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGTAIDRILGEMVHSKSMTIPIDYVLCIGHFLGKDEDVYTFFEPLPTDHISMARTKGTDVPKVERRSLKFPPNRSGSKSTHNKTRDLPNIERKTNNQASSNGRSKQSPENIQWNVLDLKVENYFSCAVGRTRTSARYLLNGSGDVVSFLRELANASLFNT | 924 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 992992 | 998874 | + | Conep06aG0021200.1 | Cone6ag0210 | 439094 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone6ag0210 | 924 | Gene3D | Glycogen Phosphorylase B; | 85 | 339 | - | - | |
| Cone6ag0210 | 924 | MobiDBLite | consensus disorder prediction | 816 | 872 | - | - | |
| Cone6ag0210 | 924 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like | 340 | 542 | - | - | |
| Cone6ag0210 | 924 | MobiDBLite | consensus disorder prediction | 11 | 30 | - | - | |
| Cone6ag0210 | 924 | Gene3D | - | 615 | 776 | IPR023214 | - | |
| Cone6ag0210 | 924 | NCBIfam | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | 93 | 558 | IPR012766 | GO:0003825(InterPro)|GO:0005992(InterPro) | |
| Cone6ag0210 | 924 | Gene3D | - | 681 | 761 | - | - | |
| Cone6ag0210 | 924 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Cone6ag0210 | 924 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 93 | 561 | - | - | |
| Cone6ag0210 | 924 | CDD | GT20_TPS | 93 | 558 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
| Cone6ag0210 | 924 | MobiDBLite | consensus disorder prediction | 855 | 872 | - | - | |
| Cone6ag0210 | 924 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 85 | 918 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER) | |
| Cone6ag0210 | 924 | SUPERFAMILY | HAD-like | 588 | 917 | IPR036412 | - | |
| Cone6ag0210 | 924 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 | 681 | 761 | - | - | |
| Cone6ag0210 | 924 | Pfam | Trehalose-phosphatase | 614 | 819 | IPR003337 | GO:0005992(InterPro) | |
| Cone6ag0210 | 924 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 | 85 | 339 | - | - | |
| Cone6ag0210 | 924 | Gene3D | Glycogen Phosphorylase B; | 340 | 542 | - | - | |
| Cone6ag0210 | 924 | CDD | HAD_TPP | 589 | 809 | - | - | |
| Cone6ag0210 | 924 | Pfam | Glycosyltransferase family 20 | 93 | 558 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone6ag0210 | Cone-Chr6:992992 | Cone8ag0594 | Cone-Chr8:5022593 | 4.37E-136 | dispersed | |
| Cone1ag0235 | Cone-Chr1:1538897 | Cone6ag0210 | Cone-Chr6:992992 | 0 | wgd | |
| Cone3ag1433 | Cone-Chr3:33088889 | Cone6ag0210 | Cone-Chr6:992992 | 2.38E-125 | wgd | |
| Cone5ag1625 | Cone-Chr5:11434317 | Cone6ag0210 | Cone-Chr6:992992 | 0 | wgd | |
| Cone6ag0210 | Cone-Chr6:992992 | Cone9ag0238 | Cone-Chr9:1015255 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone6ag0210 | K16055 | - | csv:101204478 | 1516.9 |