Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone6ag0231 | ATGAGATTAGTATCAGTTGCTTCATTATCAGTTCTGCTAGCTTTTGGGGGCATATTAACGTTTGCATGGAGAGTTCTGAACTGGGTTTGGTTCAGGCCCACGAAGCTGGAAAAGTTGCTGAGAGAACAAGGCCTTTCCGGCAATTCTTATCGGATTTTGTCCGGAGACATAAAGGAGAGCTCCATGATGATAGCCCATGCAACTTCTAAGCCCATCAACTTCTCACATGATATTGCACACCGAGTCATTCCATTTGTCGACCAGACAGTAAAAAACTACGGTAAGAATTCTTTTATCTGGATTGGCCCTAACCCCAGAGTGAACATTATGGCCCCGGAATTATTGAATATAATCTTCTCCAAGATCAATGAATTCACAAAACCAAAGTCAAATCCTCTGTTAGAGCTGCTTGCAACTGGCCTTGTTACCTATGAGGGCGAGAAATGGGGTAAGCACAGAAAGATAATCAACCCAGCTTTCCAATTAGAGAATTTAAAGCTTATGTTACCAGCGCTCTGTCTGAGTTGTGATGAGATGATAAGCAAATGGGAAAGATCGACCTCTGATCAAGAAGGGTTGTGTGAGCTAGACGTGTTTCCTTATCTGCGAAACTTAACAAGTGATGCTATTTCCCGAACTGCATTCGGAAGTAGTTTTGAAGAAGGCAGAAAGATTTTCGAGCTTCTAATAGAGCAAGGCAATCTCGTTAGTAAGCAAGTTTTCCAGAAAGTTTACATTCCTGGATGGAGGTTTCTGCCAACGAAGACAAATAGAAGGATGAAGGAAATCGATAAAGAAATAAGAGCGTTACTCATGGGTATAATAATAAGTAAACGAGAGAAAGCAACAAAGGAAGGCATGGCTAATGATACTAATAATGACCTGTTAGGCATCCTCCTTCAATCTAATTTCAAAGAAATCCGAGAACAGGGCAATAACAAGAATATGGGATTGAGTATGAGAGATGTGGTTGAGGAATGTAAACTATTTTATTTCGCTGGGCAAGAGACTACTTCTGTTTTGCTTGCTTGGACTATGGTTTCACTCAGTAAGCATCCGGAATGGCAAGATCGAGCAAGAGCGGAAGTGTTACAAGCTTTTGGAACCAACAAACCAGACTTTGATGGTCTAAACCGCCTCAAAGTTGTAACCATGATTCTTCATGAGGTTCTAAGATTATATCCACCTGTTGCTAATATGGATCGAAAAGTGCAATATGAAACAAGATTCGGGAAATTCAAATTGCCAGCTGGAGTGTTGGTAGGGTTACCCACTTTATTAATCCATCACGACAAGGAATTGTGGGGTGAAGATGCAGATGAATTCAAACCAGAAAGATTCGCAGAGGGAGTTTCAAAGGCGACAAAAAATCAAATGGCATTCTTCCCATTTGGATGGGGTCCTCGAATTTGCATTGGTCAAAACTTTGCCATGGTAGAAGCTAAACTGGCTTTGTCCATGATTTTACAACGCTTCTCCTTTGAGCTCTCCCCATCTTATGCTCATGCTCCTTTTACTGTTCTGACTCTCCAGCCACAGTATGGTGCTCATATCTTCCTACGCAGAATTTAG | 1572 | 41.41 | MRLVSVASLSVLLAFGGILTFAWRVLNWVWFRPTKLEKLLREQGLSGNSYRILSGDIKESSMMIAHATSKPINFSHDIAHRVIPFVDQTVKNYGKNSFIWIGPNPRVNIMAPELLNIIFSKINEFTKPKSNPLLELLATGLVTYEGEKWGKHRKIINPAFQLENLKLMLPALCLSCDEMISKWERSTSDQEGLCELDVFPYLRNLTSDAISRTAFGSSFEEGRKIFELLIEQGNLVSKQVFQKVYIPGWRFLPTKTNRRMKEIDKEIRALLMGIIISKREKATKEGMANDTNNDLLGILLQSNFKEIREQGNNKNMGLSMRDVVEECKLFYFAGQETTSVLLAWTMVSLSKHPEWQDRARAEVLQAFGTNKPDFDGLNRLKVVTMILHEVLRLYPPVANMDRKVQYETRFGKFKLPAGVLVGLPTLLIHHDKELWGEDADEFKPERFAEGVSKATKNQMAFFPFGWGPRICIGQNFAMVEAKLALSMILQRFSFELSPSYAHAPFTVLTLQPQYGAHIFLRRI | 523 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 1071493 | 1073654 | + | Conep06aG0023300.1 | Cone6ag0231 | 439115 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone6ag0231 | 523 | CDD | CYP72 | 83 | 518 | - | - | |
| Cone6ag0231 | 523 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 464 | 473 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone6ag0231 | 523 | Pfam | Cytochrome P450 | 86 | 499 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0231 | 523 | SUPERFAMILY | Cytochrome P450 | 79 | 521 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0231 | 523 | PRINTS | E-class P450 group I signature | 90 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0231 | 523 | PRINTS | E-class P450 group I signature | 471 | 494 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0231 | 523 | PRINTS | E-class P450 group I signature | 425 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0231 | 523 | PRINTS | E-class P450 group I signature | 205 | 223 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0231 | 523 | PRINTS | E-class P450 group I signature | 342 | 368 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0231 | 523 | PRINTS | E-class P450 group I signature | 461 | 471 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0231 | 523 | PRINTS | E-class P450 group I signature | 322 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0231 | 523 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 19 | 515 | IPR050665 | GO:0004497(PANTHER) | |
| Cone6ag0231 | 523 | FunFam | Cytochrome P450 734A1 | 30 | 523 | - | - | |
| Cone6ag0231 | 523 | Gene3D | Cytochrome P450 | 73 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0231 | 523 | PRINTS | P450 superfamily signature | 462 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0231 | 523 | PRINTS | P450 superfamily signature | 333 | 350 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0231 | 523 | PRINTS | P450 superfamily signature | 385 | 396 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0231 | 523 | PRINTS | P450 superfamily signature | 471 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone6ag0231 | Cone-Chr6:1071493 | Cone9ag0266 | Cone-Chr9:1123186 | 0 | dispersed | |
| Cone6ag0231 | Cone-Chr6:1071493 | Cone6ag0232 | Cone-Chr6:1075634 | 6.05E-232 | tandem | |
| Cone6ag0231 | Cone-Chr6:1071493 | Cone9ag0264 | Cone-Chr9:1105061 | 8.84E-272 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone6ag0231 | - | - | - | 0.0 |